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Ls 3801

Manufactured by Beckman Coulter
Sourced in Germany, United States

The LS 3801 is a laser particle size analyzer designed for the measurement of particle size distribution in liquid suspensions. It utilizes laser diffraction technology to provide accurate and precise particle size analysis across a wide range of particle sizes.

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18 protocols using ls 3801

1

H-Thymidine Incorporation Assay for DNA Synthesis

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The [3H]-thymidine incorporation assay was used to measure DNA synthesis. Briefly, the HRMVECs were first quiesced, trypsinized, and plated on 24-well plate at a concentration of 2 × 105 cells per mL of the medium. IL-33 (20 ng/mL) or vehicle were added to the medium and the cells were incubated for 6 h. After 6 h, the HRMVECs were pulse-labeled with 1 μCi/ml of [3H]-thymidine for 24 h. The cells were then washed with cold PBS and collected in 3 ml of cold EDTA (5 mM). Three milliliters of 20% (w/v) cold trichloroacetic acid (TCA) was then added to cells and vortexed vigorously to lyse the cells. The cells were then incubated on ice for 30 min and then filtered through a GF/F glass microfiber filter. The filter was then washed with cold TCA (5%) and then with cold ethanol. The filter was dried, placed in a vial containing liquid scintillation fluid and the radioactivity was measured using a liquid scintillation counter (Beckman LS3801). The counts/min/well were measured to assess DNA synthesis.
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2

Measuring DNA Synthesis in Endothelial Cells

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DNA synthesis was measured by [3H]-thymidine incorporation. Briefly, HRMVECs and MRMVECs transfected with non-targeted or on-targeted siRNA or infected with Ad-GFP or Ad-dnSTAT3 were plated onto 6-well plates, allowed to grow to 70-80% confluence, synchronized for 24 h and then treated with or without VEGFA (40 ng/ml) for 24 h. After 6 h of VEGFA addition, the cells were pulse-labeled with 1 µCi/ml of [3H]-thymidine for 18 h. After 24 h incubation period, cells were washed with cold PBS, trypsinized and pelleted by centrifugation. The cell pellet was resuspended in 3 ml of 20% (w/v) cold TCA and vortexed vigorously to lyse cells. The mixture was incubated on ice for 30 min and then passed through a GF/F glass microfiber filter. The filter was washed first with 3 ml of 5% cold TCA and then 3 ml of cold ethanol, dried, placed in liquid scintillation vial containing 5 ml of scintillation fluid and the radioactivity was counted in liquid scintillation counter (Beckman LS 3801). DNA synthesis was expressed as counts/min/well or fold changes.
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3

In Vitro Cytotoxicity Evaluation of α-Sarcin Constructs

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To evaluate the in vitro cytotoxic activity of α-sarcin-based constructions, inhibition of protein biosynthesis was determined as described (Lacadena et al. 2007 (link); Carreras-Sangrà et al. 2012 (link)). GPA33-positive cells (SW1222 and LIM1215) and GPA33-negative cells (HT-29 and A431) were incubated with different concentrations of IMTXA33αS, free fungal wild-type α-sarcin or scFvA33. After 72 h of incubation at 37°C, the medium was removed and replaced with a fresh one supplemented with 1 mCi per well of L-[4,5-3H]-Leucine (166 Ci/mmol; Amersham, UK). After an additional incubation for 6 h, the medium was also removed and cells were fixed with 5.0% (w/v) trichloroacetic acid in PBS and washed three times with cold ethanol. The resulted dried pellet was dissolved in 0.2 ml of 0.1 M NaOH containing 0.1% SDS, and radioactivity was counted on a Beckman LS3801 liquid scintillation counter. To calculate the IC50 values (protein concentration inhibiting 50% protein synthesis) the results were expressed as a percentage of the radioactivity incorporated in control samples incubated without any of the three proteins, wild type α-sarcin, scFvA33 or the immunotoxin IMTXA33αS. Three independent replicate assays were conducted to calculate the average IC50 values.
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4

Measuring Phospholipid Synthesis in Lung Explants

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For evaluating the rate of phospholipid synthesis, cultured lung explants were exposed to [methyl-3H] choline chloride (0.2 μCi/ml) in defined medium. At the end of the incorporation period, the radioactive medium was removed and cells were rinsed three times with phosphate-buffered saline before made-up 10% lung homogenate. The lung tissue homogenate had its lipids extracted by chloroform/methanol 2:1 (vol/vol). Dried by blow with nitrogen gas, and redissolved in 200 μl chloroform. The liquid scintillation count (Beckman LS3801) was used to determine incorporation of [3H]-choline into PC. Total proteins were measured by Lowry method and the results were shown in cpm/mg protein.
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5

Chloride Uptake in Neutrophils

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Measurement of 36CI uptake was performed in accordance with a previously described method [15 (link)]. Briefly, 6 × 106/ml neutrophils were incubated in HEPES buffer at 37°C for 1 h (in mM: 20 HEPES, 118 NaCl, 4.7 KCl, 1.2 MgSO4 and 2.5 CaCl2, pH 7.4). Neutrophils pretreated with phorbol myristate acetate (PMA) (2 μg/ml) for 15 min were exposed to 2 μCi/ml 36CI in the presence or absence of glycine (1 mM) for 10 s and transferred to a Wheaton 25 mm vacuum filter system. 36CI uptake was terminated by washing twice with ice-cold HEPES buffer through 25 mm glass microfiber filters (Whatman GF/A; Cytiva, Marlborough, MA, USA). Glass fiber filters were placed in scintillation vials, and proteins were solubilized with 1.6 ml of 1 N NaOH for 1 h. EcoLume (8 ml) was added and radioactivity was measured using a liquid scintillation detector (LS-3801; Beckman, Fullerton, CA, USA). In some experiments, neutrophils were pretreated for 30–60 min with strychnine (1 μM) before exposure to 2 μCi/ml 36CI in the presence of glycine (1 mM) for 10 s.
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6

Lipid Profiling and TG Uptake Analysis

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Peripheral blood was obtained by retro-orbital venipuncture. TGs, total cholesterol, and high-density lipoprotein (HDL) cholesterol were analyzed on an ADVIA 1800 automated clinical chemistry system (Siemens). Pooled plasma containing 1 mM EDTA was fractionated by fast protein liquid chromatography (FPLC) using a Superose 6 column (GE Healthcare) (13 (link)). FPLC cholesterol and TG levels were measured using Cholesterol E and L-Type TG M assays (Wako). Liver neutral lipids were analyzed by thin layer chromatography (TLC). For analysis of TG uptake, mice received a single injection of anti-miR-29a or anti-miR-control, followed by gavage of 200 µl olive oil containing 2 µCi of 14C-Triolein 6 days later. Gavaged mice were fasted and livers and epididymal white adipose tissues (eWATs) harvested 6 hours later. Tissues were weighed and digested in 500 µl of 1 N NaOH at 65°C for 1 hour, bleached with 50 µl 0.5 M EDTA and 100 µl 35% H202, mixed with liquid scintillation cocktail (Ultima Gold, Perkin Elmer), and analyzed using a Beckman LS 3801 liquid scintillation counter.
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7

Monitoring DNA Synthesis in VSMC Proliferation

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DNA synthesis was monitored using a [3H]-thymidine incorporation assay, as previously described43 (link), using the same cell culture conditions as outlined above for the cell proliferation assay. [3H]-thymidine (2 μCi/mL) was bound for 4 h before harvesting under PDGF-BB-stimulated conditions (25 ng/mL) in serum-free medium. The reaction was stopped by aspirating the medium and subjecting the cultures to a series of washes with phosphate-buffered saline (PBS) containing ethanol/ether (1:1, v/v) and 10% trichloroacetic acid on ice. The acid-insoluble products containing [3H]-thymidine were extracted in 250 µl of 0.5 M NaOH/well, and this solution was then combined with 3 mL scintillation cocktail (Ultimagold; Packard Bioscience, Meriden, CT, USA) and measured using a liquid scintillation counter (LS3801; Beckman, Düsseldorf, Germany). To identify the active components of the AO extract, we used a bromodeoxyuridine (BrdU) colorimetric kit (Roche, Basel, Switzerland) to investigate the effect of GA on DNA synthesis during VSMC proliferation. After stimulation with PDGF-BB (25 ng/mL) for 24 h, VSMCs were labeled with BrdU, according to the manufacturer’s instructions, and BrdU-labeled cells were measured using a microplate reader.
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8

Viral Particle Separation by Sucrose Gradient

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The method of separation of viral particles was modified from the original protocol described (107 (link)). Sucrose gradients were prepared fresh before each fractionation with 15% (w/v) and 30 (w/v)% sucrose in 10 mM Tris (pH 7.4)-10 mM NaCl-1.5 mM MgCl2. The Gradient Master gradient maker (Biocomp) was used for continuous 15–30 % gradient preparation. Gradients were prepared in Beckman Ultra-Clear Centrifuge Tubes (14 × 89 mm, Beckman Coulter). Following preparation, 1 mL of radiolabeled lysate was loaded on top of the continuous sucrose gradient and was sedimented via centrifugation for 3h at 27500 rpm at 15°C using a Beckman SW41 rotor in Beckman ultracentrifuge at slow acceleration and deceleration with no brake. After centrifugation, each tube was placed into the Fraction Recovery System (Beckman Coulter) and the bottom of the tube was punctured, 500µL fractions were collected from the bottom of the tube into 1.5mL Eppendorf tubes by gravity flow. Radioactivity in each fraction was calculated by taking 20µL of each fraction and diluting in 4mL of CytoScint Liquid Scintillation Cocktail (MP Biomedicals) with the following measurement in a liquid scintillation counter (Beckman LS-3801).
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9

3D ON-TOP Assay for DNA Synthesis

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DNA synthesis was measured by [3H]-thymidine incorporation using 3D ON-TOP assay (Lee et al., 2007 (link)). Briefly, quiesced HRMVECs were trypsinized to a single-cell suspension and 1 × 105 cells in 0.5 ml of the medium were plated onto a matrigel-coated surface of a 24-well plate and VEGFC (100 ng/ml) or vehicle were added to the medium. Cells were allowed to settle for 30 min at 37°C, following which 0.5 ml of medium containing 10% matrigel was added on top of the cells. Six hours later, the cells were pulse-labeled with 1 μCi/ml of [3H]-thymidine for 24 h, at which time cells were washed with cold PBS, collected along with matrigel in 3 ml of 5 mM EDTA in cold PBS into 15 ml centrifuge tubes. The tubes were kept on ice for 15 min to allow the breakdown of matrigel. The cells were then added with 3 ml of 20% (w/v) cold TCA and vortexed vigorously to lyse the cells. The cell mixture was allowed to remain on ice for 30 min and then passed through a GF/F glass microfiber filter. The filter was washed once with 5% cold TCA and once with cold ethanol, dried, placed in a liquid scintillation vial containing the scintillation fluid and the radioactivity was measured in a liquid scintillation counter (Beckman LS 3801). DNA synthesis was expressed as counts/min/well.
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10

VEGFA-Stimulated DNA Synthesis Assay

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DNA synthesis was measured by [3H]-thymidine incorporation59 (link). HRMVECs were plated onto 6-well plates, allowed to grow to 70–80% confluence, growth-arrested for 24 hrs, treated with and without VEGFA (40 ng/ml) for 30 hrs and pulse-labeled with 1 μCl/ml of [3H]-thymidine for the last 24 hrs of the 30-hrs incubation period. Cells were collected by trypsinization followed by centrifugation and the cell pellet was resuspended in cold 10% (w/v) trichloroacetic acid. After vortexing the mixture was kept on ice for 30 min and was then passed through a GF/F glass microfiber filter. The filter was washed once with cold 5% tricholoroacetic acid, once with cold 70% ethanol, dried, placed in a scintillation vial containing the scintillation cocktail and the radioactivity was measured in liquid scintillation counter (Beckman LS 3801). DNA synthesis was expressed as counts/min/dish.
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