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Silica gel

Manufactured by GE Healthcare
Sourced in China

Silica gel is a desiccant material composed of small, porous beads or granules that are commonly used in various laboratory applications. Its primary function is to absorb and remove moisture from the surrounding environment, helping to maintain a dry, controlled atmosphere. Silica gel is known for its high surface area and strong adsorption properties, making it an effective drying agent.

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6 protocols using silica gel

1

Comprehensive Analytical Techniques for Compound Characterization

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The UV spectra were measured on a Shimadzu UV-1700 spectrometer (Shimadzu Corporation, Kyoto, Japan). The IR spectra were measured on a Nicolet 10 Microscope Spectrometer (Thermo Scientific, San Jose, CA, USA). The 1D and 2D-NMR spectra were recorded on Bruker-AC (E)-500 spectrometer (Bruker AM 500, Fällanden, Switzerland) using tetramethylsilane (TMS) as an internal standard. The HR-ESI-MS was determined on a Bruker microTOF-Q instrument (Bruker BioSpin, Rheinstetten, Germany). Column chromatography was performed with silica gel (200–300 mesh; Qingdao Marine Chemical Inc., Qingdao, China), sephadex LH-20 (GE Healthcare), and ODS (50 µm; YMC Co. LTD., Kyoto, Japan). Preparative high performance liquid chromatography (HPLC) separations were performed on a SEP system (Beijing Sepuruisi scientific Co., Ltd., China) equipped with a variable-wavelength UV detector, using a YMC-Pack ODS-A column (250 × 20 mm, 5 μm). Chemical reagents for isolation were of analytical grade and purchased from Tianjin Siyou Co., Ltd., China. Biological reagents were from Sigma Company. Human heptocellular (HepG2), and breast (MCF-7) cancer cell lines were from Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College, China.
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2

Spectroscopic Analysis of Compounds

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Optical rotations were determined using an MCP200 automatic polarimeter (Anton Paar, Graz, Austria). Ultraviolet spectra were recorded on a DU 730 nucleic acid/protein analyzer (Beckman Coulter, Brea, CA, USA). IR spectra (film) were measured with a Tensor 27 FT-IR spectrometer (Bruker, Ettlingen, Germany). 1D and 2D NMR spectra were recorded on a Bruker AV-600 spectrometer, δ in ppm rel. to TMS, J in Hz. ESIMS were recorded using an 1290-6420 Triple Quadrupole LC-MS spectrometer (Agilent, Santa Clara, CA, USA). HRESIMS were recorded with an Agilent G6230 TOF mass spectrometer. Silica gel (100–200 mesh, 300–400 mesh, Qingdao Marine Chemical Ltd., Qingdao, China), Sephadex LH-20 (GE Healthcare Bio-sciences AB, Uppsala, Sweden), YMC*GEL ODS-A (S-50 μm, 12 nm) (YMC Co., Ltd., Kyoto, Japan), and reversed-phase HPLC (Rohm and Hass Shanghai Chemical Industry Co., Ltd., Shanghai, China) were used for column chromatography. Biological assays were analyzed using a microplate reader (BioTek Synergy H1, BioTek Instruments, Winooski, VT, USA).
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3

Characterization of Natural Products

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Optical rotations were determined with a Perkin-Elmer 41 polarimeter equipped with a sodium lamp (589 nm). UV, CD, and FT-IR spectra were performed on a Varian Cary 50, a JASCO-810 CD spectrometer, and a Bruker Vertex 70 instruments, respectively. 1D and 2D NMR spectra were recorded on a Bruker AM-400 spectrometer, and the 1H and 13C NMR chemical shifts were referenced with respect to the solvent or solvent impurity peaks. HRESIMS were carried out in the positive ion mode on a Thermo Fisher LC-LTQ-Orbitrap XL spectrometer. X-ray data were collected using a Bruker APEX DUO instrument. Column chromatography was conducted with silica gel (200–300 and 300–400 mesh; Qingdao Marine Chemical Inc., China), Sephadex LH-20 (GE Healthcare Bio-Sciences AB, Sweden), and MCI gel (75–150 μm, Mitsubishi Chemical Corporation, Tokyo, Japan). Semi-preparative HPLC was carried out on a Dionex quaternary system with a diode array detector at a flow rate of 2.5 mL/min using a reversed-phased C18 column (5 μm, 10 × 250 mm, YMC-pack ODS-A).Thin-layer chromatography (TLC) was performed with silica gel 60 F254 (Yantai Chemical Industry Research Institute) and RP-C18 F254 plates (Merck, Germany).
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4

Comprehensive Analytical Techniques for Natural Products

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Optical rotations were measured with an AntonPaar MCP 200 automatic polarimeter. Ultraviolet (UV) spectra were obtained on a UV-2550 spectrophotometer (Shimadzu Corporation, Tokyo, Japan). IR spectra were recorded on a Bruker Tensor 27 FT-IR spectrometer (film). 1D and 2D-NMR spectra were carried out on a Bruker AM-400 and an Avance-500 spectrometer, δ in ppm rel. to TMS, J in Hz. ESIMS and HRESIMS were measured with a Bruker miXis TOF-QII mass spectrometer (Bruker, Fällanden, Switzerland), respectively. Silica gel (100–200 mesh, 300–400 mesh, Qingdao Marine Chemical Ltd., Qingdao, China), Sephadex LH-20 (GE Healthcare Bio-sciences AB, Uppsala, Sweden), and YMC GEL ODS-A (S-50 μm, 12 nm) (YMC Co., Ltd., Kyoto, Japan) were used for column chromatography. Semipreparative HPLC analyses were performed using an ODS column (YMC-ODS-A, 250 × 20 mm, 5 μm). Circular dichroism (CD) spectra were measured on a Chirascan circular dichroism spectrometer (Applied Photophysics Ltd., Leatherhead, UK). MTT assays were analyzed using a microplate reader (BioTek Synergy H1, BioTek Instruments, Inc., Vermont, USA).
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5

Characterization of Natural Compounds

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Optical rotations were acquired on a Jasco P-2000 polarimeter (Jasco Inc., Tokyo, Japan). UV data were recorded using a Jasco V-650 spectrophotometer (Jasco Inc., Tokyo, Japan). Experimental electronic circular dichroism spectra (ECD) were recorded on a Chirascan spectrophotometer. IR spectra were measured on a Nicolet iN 10 Micro FTIR spectrophotometer (Thermo Nicolet Inc., Waltham, MA, USA). NMR spectra were recorded on Varian Inova-300, 500 and 600 spectrophotometers (Varian Inc., Palo Alto, CA, USA). HRESI-MS were obtained using an Agilent 1100 UPLC-Q-TOF mass spectrometer (Agilent Technologies Ltd., Santa Clara, CA, USA). Column chromatography was performed with silica gel (200–300 mesh; Qingdao Marine Chemistry Company, Qingdao, China), Sephadex LH-20 (GE Healthcare Bio-Sciences AB, Uppsala, Sweden) and reversed-phase C18 silica gel (40–60 µm, Alltech, Deerfield, IL, USA). Preparative high-performance liquid chromatography (HPLC) separations were carried out using a Shimadzu LC-10 A system equipped with a YMC-Pack ODS-A column (250 × 20 mm, 5 µm, Kyoto, Japan) and a Shimadzu SPD-20 A detector (Shimadzu).
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6

Characterization of Secondary Metabolites

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Semipreparative HPLC was recorded using a Dionex UltiMate 3000 HPLC system equipped with multiple wavelength detectors utilizing YMC-Pack-ODS-A column (250 × 10 mm, 5 μm). Optical rotations were acquired by using an SGW-2 digital polarimeter. IR spectra were measured with a Thermo fisher Nicolet 6700 FT-IR spectrometer in KBr discs. HRESIMS data were obtained on a Thermo Scientific Q Exactive mass spectrometer. 1H NMR (600 MHz), 13C NMR (150 MHz), and 2D NMR were tested by a Bruker-AV-600 NMR spectrometer using solvent signals as references. The ECD spectra were measured using a Science MOS-450 spectrometer. Column chromatography was performed with silica gel (200–300 mesh; Qingdao Ocean Chemical Co. Ltd., Qingdao, China), Sephadex LH-20 gel (GE Healthcare, Uppsala, Sweden), and ODS-A reversed-phase silica gel (50 μm; YMC Co. Ltd., Kyoto, Japan). The supernatant was treated with macroporous resin HP20 (Mitsubishi Chemical Co. Ltd., Kyoto, Japan).
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