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10 protocols using anti human igg antibody

1

Quantifying Antibody-Antigen Interactions via ELISA

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ELISAs were performed according to standard protocols. Briefly, 384-well Maxisorp plates were coated with NeutrAvidin (10 μg/ mL) overnight at 4 °C and subsequently blocked with BSA (2% w/v) for 1 h at 20 °C. 10−100 nM pY antigens were captured on the NeutrAvidin-coated wells for 30 min followed by the addition of various concentrations of phage or recombinant antibodies for 30 min. The secondary Abs were either a horseradish peroxidase (HRP)-conjugated anti-M13 phage antibody (Sino Biological) for phage ELISA or an antihuman-IgG antibody (Sigma-Aldrich) for recombinant protein ELISA. The ELISA plates were washed three times after each incubation, and Ab binding was detected by TMB substrate (VWR) and read at 450 nm.
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2

Quantifying Anti-Thyroglobulin IgG-Secreting Cells

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To count the anti-Tg IgG antibody-secreting plasma cells we used the same experimental design as in the proliferation assay for the cultivation and treatment of PBMCs isolated from HT patients and healthy volunteers for 24 h. The cells were stimulated with 3 μg/mL CpG (InvivoGen, Toulouse, France) plus 5 μg/mL LPS (from E. coli, Sigma) for 3 additional days. The control samples were cultured in RPMI medium only. Later, the pre-incubated PBMCs were transferred to the respective wells in a 96-well ELISpot plate (Millipore, Bedford, MA, USA) pre-coated with 5 μg/mL Tg1/2 peptides (2.5 μg Tg1 + 2.5 μg Tg2) for 12–16 h at 4 °C and were further cultured for additional 4 h in a humidified 5% CO2 atmosphere at 37 °C. After extensive washing, the samples were incubated with an alkaline phosphatase-conjugated anti-human IgG antibody for 1 h and developed by NBT/BCIP substrate (Sigma). The number of colored spots corresponding to anti-Tg IgG antibody-producing plasmocytes was counted by C.T.L.Immunospot S6 Ultimate UV Image Analyzer (Bonn, Germany). Each donor (patient or healthy volunteer) was tested separately.
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3

Neutralizing Antibody Evaluation of SARS-CoV-2 Variants

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The SARS‐CoV‐2 variants of concern, that is, Alpha (United Kingdom, B.1.1.7: N501Y), Beta (South Africa, B.1.351: K417N, E484K, N501Y), Gamma (Japan/Brazil, P.1: K417T, E484K, N501Y), and Delta (India, B.1.617.2: L452R, T478K)), Omicron (South Africa BA.1(B.1.1.529): G339D, S371L, S373P, S375F, K417N, N440K, G446S, S477N, T478K, E484A, Q493R, G496S, Q498R, N501Y, Y505H), Epsilon (US‐California, B.1.427: L452R), Kappa (India, B.1.617.1: L452R, E484Q), Lambda (Peru, C.37; L452R, F490S), Deltacron (AY.4/BA.1: G339D, S371L, S373P, S375F, K417N, N440K, G446S, L452R, S477N, T478K, E484A, Q493R, G496S, Q498R, N501Y, Y505H), and Anti‐SARS‐CoV‐2 Neutralizing Antibody were purchased by Sinobiological (China, Beijing). Recombinant ACE2 and human Cyclophilin A were purchased from Thermo Fisher Scientific (WALTHAM, MA, USA). Anti‐Human IgG antibody and Anti‐rabbit IgG were purchased by sigma (St. Louis, MO, USA). The MILF buffers were used: 2.8 mM Triglyceride, 1 mM Ascorbic acid, 55 mM Hemoglobin, and 3 mM Bilirubin.
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4

Quantifying HIV-1 gp120-specific Antibodies

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Gp120-specific IgG concentration and gp120-specific IgA titers were determined by ELISA as described before (Ruiz et al., 2016 (link)). 96-well flat-bottomed half-area plates (GreinerBio-One, Germany) were coated with 25 ng/well of gp120BAL. For gp120-specific IgG quantitation, 25 μl/well of 1/10000 (C, CT and HIV+-P) or 1/10 (ESN and HD) plasma dilutions were dispensed in triplicate. A standard curve was constructed, consisting in two-fold serial dilutions of the anti-gp120 2G12 monoclonal antibody starting at 24 ng/ml. IgG detection was performed using an anti-human IgG antibody labeled with horseradish peroxidase (HRP, Sigma-Aldrich, USA) and developed with TMB-ELISA solution (BD Biosciences, USA). Absorption at 450 nm was read on Multiskan EX Microplate Reader (Thermo/Labsystems). IgG concentration was extrapolated from the standard curve and multiplied by the dilution factor. Gp120-specific IgA levels were determined by end-point titration. Two-fold serial dilutions of plasma were prepared, starting at 1:20. Secondary antibody was an anti-human IgA-HRP (Sigma-Aldrich, USA). Plates were developed and read as described for IgG. End-point IgA titer was defined as the reciprocal of the highest plasma dilution at which the average OD value was ≥ 2-fold the average OD value of control wells. Sera from HIV-negative subjects were tested as controls.
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5

Characterizing Mutant Antibody Binding

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Wild type (WT) and mutant AP33 MAbs were produced by transient transfection of HEK cells with expression vectors encoding the appropriate antibody heavy and light chain combinations as previously described29 (link). The mutagenesis was carried out on a human-mouse chimera comprising the variable region of AP33 combined with a human constant region, to enable testing of interaction with murine Ab2s. To measure the concentrations of WT and mutant AP33 MAbs, serially diluted IgG-containing media were added, with an appropriate IgG standard alongside, to microtitre plates coated with anti-human IgG antibody (Sigma I-9010; 1:10,000). Captured chimeric MAbs were detected with anti-human IgG HRP (Sigma A-0170; 1:10,000), followed by TMB. Equal amounts of WT and mutant AP33 MAbs were then captured onto microtitre plates coated with anti-human IgG antibody. Ab2 MAbs were added at 1 µg/ml and incubated for 1 h at RT. Bound Ab2 MAbs were detected with anti-mouse IgG HRP (Sigma A4416; 1:5000) followed by TMB. Absorbance was measured at 450 nm.
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6

Quantitative Immunoblotting of YB-1 Proteins

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Serum samples were immediately prepared and stored at −80 °C until use. Plasma samples were diluted 1:1 with PBS before freezing at −80 °C. Recombinant His-YB-1 (2.5 µg), Flag-YB-1 (1.5 µg) and GST-YB-1 proteins (FL 0.5µg; ∆1 0.5 µg; ∆2 0.5 µg; ∆3 0.5 µg; ∆4 1 µg; ∆5 1 µg; ∆8 1 µg; ∆9 1.5 µg) were used as antigens. After electrophoresis, proteins were blotted onto nitrocellulose membranes and blocked with 2.5% dry milk in TBST for 1 h at room temperature. Blots were probed with human serum samples diluted 1:200 in TTBS and incubated overnight at 4 °C. Bound antibodies were detected with secondary anti-human-IgG antibody (Sigma-Aldrich; 1:5000) and visualized with peroxidase-conjugated anti-mouse IgG antibody (GE Healthcare, Buckinghamshire, UK; 1:2000) using the ECL-system (Thermo Fisher Scientific) on an Intas gel imaging system (Intas, Göttingen, Germany). Densitometry readings were performed with LabImage (Kapelan, Leipzig, Germany).
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7

ELISA Peptide Antibody Detection

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For the ELISA assays, each well of 96-well Nunc ImmobilizerTM microtitration plates (Thermo scientific) was coated with 1 μg of one of the peptides diluted in Bicarbonate/carbonate coating buffer (100 mM) pH 9.6. The plates were then washed 3 times with PBS-Tween 0.2% (PBS-T) and blocked with skim milk at 2% in PBS-T for 1 h at 37 °C. They were subsequently washed 3 times with PBS-T and incubated for 45 min at 37 °C with 100 μl of a 1:200 solution of primary antibody diluted in PBS. Thereafter, the plates were washed 3× with PBS-T and then incubated for 30 min at 37 °C with a 1:1000 solution of secondary anti-human IgG antibody (Sigma-Aldrich) and/or anti-mouse IgG and IgM (Sigma-Aldrich), all horseradish peroxidase-labeled in 100 μl of PBS. After incubation with the secondary antibodies, the plates were washed 4× and O-phenyl-diaminobenzidine plus 30% H2O2 (1 μl/ml) (Sigma-Aldrich) was added to 0.05 M phosphate-citrate buffer, pH 5.0 as a peroxidase substrate before further incubation for 15 min at 27 °C. The reaction was stopped with a solution of 0.1 M 2 N H2SO4, and absorption measured at 492 nm in an ELISA Multiskan spectrum reader (Thermo). Sera from healthy individuals living in the same areas of Chile and Panama or mouse preinfected sera were used to calculate the cut-off value using the formula: median + 3 × SD of the negative samples.
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8

Nanoparticle Immunoassay Protocol

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Nanoparticle suspensions (50 and 60 nm diameter) in PBS and all chemicals used in the assay preparation were purchased from Sigma Aldrich, Gillingham, UK; including 4-nitrobenzenethiol (NBT), anti-human IgG antibodies dissolved in PBS, human IgG, BSA (bovine serum albumin), casein, and Tween-20. The only exceptions were anti-MPT64 monoclonal antibodies and MPT64 protein (antigen), which were purchased from BBI Solutions, Portland, OR, USA, and Enogen, Cambridge, UK respectively. Microscope slides coated with gold film (100 nm thick layer, 99.9% purity) over a Cr (2–3 nm) layer were purchased from EFM Co., Salt Lake, UT, USA.
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9

ELISA Assay for Antibody Binding to Collagen, Fibronectin, and Klebsiella Proteins

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The ELISA assay for the binding of antibodies to collagen type I and II was performed using commercially available kits (CHONDREX, Inc., Redmond, WA, USA).
In the ELISA assay, for the detection of anti-fibronectin antibodies, plates (Immulon 2HB Thermo Scientific, Illkirch, France) were coated with 10 μg/ml of human fibronectin (SIGMA, St. Louis, MO, USA), and the tested antibodies were diluted in PBS 1% BSA and incubated overnight at 4°C. Plates were washed 3 times with PBS 1% Tween and one time with PBS alone. Alkaline phosphatase-labelled anti-human IgG antibodies were purchased from Sigma. IgG antibodies to Klebsiella pneumoniae were detected by ELISA using a bacterial extract adsorbed on the solid phase as described in detail elsewhere [23 (link)]. For the binding to recombinant Klebsiella pneumoniae, proline dipeptidase (MyBioSource, San Diego, CA, USA) plates were coated with 20 microgram/ml of recombinant protein in PBS. The test was then performed as described above. The binding to the other two Klebsiella pneumoniae-derived proteins was assessed using the two synthetic peptides (LFI and SET peptide) using DELFIA as described above.
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10

Western Blot Protein Detection

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Protein fractions separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) were transferred to a nitrocellulose membrane according to the method described by Blake [38 (link)]. The membrane was blocked with Tris Buffered Saline with Tween 20 (TBST) 0.5% milk at room temperature for 2 hours, washed 5 times with TBST for 5 minutes, and cut into strips that were incubated for 1 hour with anti-His antibody (Sigma-Aldrich) at 1:10,000 or with a positive control, which consisted of a pool of hyperimmune sera from P. vivax-immune primates at 1:50. Strips were then incubated for 1 h with either alkaline phosphatase-conjugated anti-mouse IgG or anti-human IgG antibodies respectively (Sigma-Aldrich) at a dilution of 1:10,000 and were then washed as before. Finally, formation of immune complexes in the membrane was assessed visually by adding TMB or NBT-BCIP substrates (Sigma Aldrich) accordingly.
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