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14 protocols using ecl luminata forte

1

Western Blot Quantification of Gastrocnemius Proteins

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Protein expressions were assessed by Western blots as described (John et al. 2017). Briefly, at the time of sacrifice, gastrocnemius muscle from the ischemic leg of each mouse was quickly removed, snap‐frozen, and stored at –80°C until further use. Protein from samples was extracted by homogenizing in the ice‐cold RIPA buffer (Boston BioProducts, Worcester, MA) containing 1 mmol/L Phenylmethylsulfonyl fluoride (Sigma, Saint Louis, MO), and 1% protease inhibitors cocktail (Sigma) and sonicated employing the Sonifier 450 (Branson Ultrasonics, Danbury, CT). The homogenates were centrifuged 17,400g for 20 min at 4°C, and the supernatants were quickly stored at –80°C until further use. The protein contents were estimated by the Bradford assay. Equal amounts of proteins (50 μg) were resolved on SDS‐PAGE (8%, 10%, 12%) and then transferred to polyvinylidene difluoride (PVDF) membranes. The respective blots were incubated with primary and secondary antibodies before visualizing them using the ECL Luminata Forte (Millipore, Temecula, CA) in a Bio‐Rad ChemiDoc system. The intensities of the bands were normalized to the housekeeping GAPDH for all the proteins examined. The quantification was performed using Image Lab™ Software (Bio‐Rad, Hercules, CA).
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2

Denaturing Protein Electrophoresis and Western Blot

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Cell samples were lysed in BEX buffer (25 mM Tris at pH 8.0, 20 mM NaCl, 0.6% w/v deoxycholate and 0.6% Igepal CA-630) and electrophoresed under denaturing conditions with NuPage Novex Bis-Tris 4%-12% gradient gels (Invitrogen) and MOPS running buffer (Invitrogen). Proteins were transferred semi-dry on polyvinylidene difluoride membranes and blocked in 1x RotiBlock (Roth) for 1 h. Incubation with primary antibodies was performed overnight at 4°C in 1x RotiBlock. The next day, blots were incubated with horseradish peroxidase-coupled secondary antibodies and analyzed with LAS-4000 (GE) by using ECL Luminata Forte (Millipore).
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3

Protein Extraction and Western Blot Analysis

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Protein was extracted from kidney tissues and cells by using RIPA buffer (Boston BioProducts, Worcester, MA, USA); with 1 mM phenylmethanesulfonyl fluoride (PMSF), and 1% protease inhibitors cocktail (Sigma, Saint Louis, MO, USA). After sonication protein lysate was centrifuged at 12,000 g for 10 min at 4 °C. Protein concentration was measured by Bradford assay. Equal amount of protein extract (25 µg) were electrophoresed by SDS-PAGE and immunoblotted onto PVDF membranes. The membranes were blocked by 5% nonfat dry milk for 1 h at room temperature and subsequently incubated overnight at 4 °C with the respective primary antibodies (1:1000). After incubation with secondary antibodies (1:5000) in room temperature, the membranes were washed and protein bands were visualized using ECL Luminata Forte (Millipore, Temecula, CA) in a Bio-Rad ChemiDoc system.
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4

Protein Extraction and Western Blot Analysis

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Protein was extracted from cells by RIPA buffer (Boston BioProducts, Worcester, MA) with 1 mM phenylmethylsulfonyl fluoride (PMSF), and 1% protease inhibitor cocktail (Sigma, St Louis, MO). After sonication, protein lysate was centrifuged at 12,000 × g for 10 min at 4°C. Protein concentration in the samples was measured by Bradford assay. An equal amount of protein extract (25 μg) was electrophoresed by SDS-PAGE and immunoblotted onto PVDF membrane. The membranes were blocked by 5% non-fat milk for 60 min at room temperature and subsequently incubated with respective primary antibodies overnight at 4°C. Membrane washed 3 times in PBS and then incubated with respective secondary antibodies for 2 hr at room temperature. The membranes were then washed, and protein bands were visualized using ECL Luminata Forte (Millipore, Temecula, CA) in a Bio-Rad ChemiDoc system. GAPDH was used as a loading control, and band intensity was quantified using ImageJ software.
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5

Protein Extraction and Western Blot Analysis

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Protein was extracted from the kidney and mouse mesangial cells (MCs) by RIPA buffer (Boston BioProducts, Worcester, MA, USA) containing 1 mM phenylmethylsulfonyl fluoride (PMSF) and a 1% protease inhibitor cocktail (Sigma, St. Louis, MO, USA). After sonication, the protein lysate was centrifuged at 12,000× g at 4 °C for 10 min. Protein concentrations of the samples were determined by Bradford assay. An equal amount of protein extract (25 μg) was electrophoresed by SDS-PAGE and immunoblotted overnight onto the polyvinylidine difluoride (PVDF) membrane. The membranes were blocked with 5% non-fat dry milk in TBST for 1 h at room temperature, washed three times in TBST, and subsequently incubated overnight with the respective primary antibodies at 4 °C. Membranes were washed three times in TBST to remove the unbound primary antibody and then incubated with corresponding HRP-conjugated secondary antibodies for 2 h at room temperature. Thereafter, the membranes were washed and the immunoreactive protein bands were developed using ECL LuminataForte (Millipore, Temecula, CA, USA), visualized under a ChemiDoc MP System (Bio-Rad, Hercules, CA, USA) and quantified by densitometric analysis using ‘ImageJ’ software.
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6

Protein Extraction and Western Blot Analysis

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Protein was extracted from cells using RIPA buffer (Boston BioProducts, Worcester, MA), containing 1 mM phenylmethanesulfonyl fluoride (PMSF), and 1% protease inhibitor cocktail (Sigma-Aldrich, Saint Louis, MO). After sonication, protein lysate was centrifuged at 12,000 g for 10 min at 4 °C. Protein concentration was measured by Bradford assay. Equal amount of protein extract (25 μg) was electrophoretically separated by SDS-PAGE and immunoblotted onto PVDF membrane. The membranes were blocked with 5% non-fat milk for 60 min at room temperature and subsequently incubated with respective primary antibodies for overnight at 4 °C. Membranes were washed three times with PBS followed by 2 h incubation with respective secondary antibodies at room temperature. The membranes were washed to remove unbound secondary antibodies, and protein bands were visualized using ECL Luminata Forte (Millipore, Temecule, CA) in a Bio-Rad ChemiDoc system. Band intensity was quantified using ImageJ software.
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7

Protein Detection by Immunoblotting

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After lysis, proteins (20-25 μg total protein concentration, determined by BCA assay) were separated by lithium dodecyl sulphate (LDS)-polyacrylamide gel electrophoresis (NuPage Novex Bis-Tris, Thermo Fisher). For endogenous CoIP 400 μl of NuPage Novex antioxidant (Thermo Fisher) was added to maintain proteins on a reduced state. Afterwards electrophoretic transfer onto 0.2 μm pore size PVDF membrane (BioRad, Munich, Germany) was performed by tank blot. After blocking with 5% non-fat dry milk (Sigma-Aldrich) the membrane was incubated with primary antibody for 2 h at room temperature or overnight at 4°C. Afterwards, blot was incubated for 1 h at room temperature with horseradish peroxidase-conjugated secondary antibodies. Proteins were detected by ECL Luminata Forte (Millipore, Darmstadt, Germany) and LAS-4000 (GE, Healthcare, Chicago, USA).
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8

Neuregulin-Induced Akt Phosphorylation

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Cell lines were seeded into six-well plates (106 cells per well) with increasing concentrations for the indicated drugs. Twenty-four hours later, cells were stimulated with 100 ng/ml neuregulin (NRG, Cell Signaling, Danvers, MA) for 10 min at 37 °C. Subsequently, cells were lysed using RIPA buffer (50 mM Tris, 150 mM NaCl, 0.5% Na-deoxycholate, 1% NP-40, 2 mM EDTA) followed by sonification. Finally, 20 μg of whole-cell protein lysate was resolved on a 10% Bis-Tris gel (Roth, Karlsruhe, Germany) at 30 mA per gel. Proteins were transferred by wet blotting (Criterion™ blotter, Bio-Rad, Hercules, CA) onto a PVDF membrane (Merck-Millipore, Billerica, MA), and probed with primary antibodies p-Akt (1:1000; Cell Signaling), Akt (1:1000; Cell Signaling), and Actin (1:2000; Sigma, Saint Louis, MO) at 4 °C over night. On the next day, membranes were incubated for 2 h with the secondary antibody goat-anti-rabbit-HRP (1:30,000; Acris, Hiddenhausen, Germany). Signals were detected using ECL Luminata forte (Merck-Millipore) and a CCD camera system (LAS 4000mini; GE Healthcare, Munich, Germany).
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9

SDS-PAGE Analysis of Membrane Proteins

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Isolated membranes and purified
hemichannels were checked for purity by gel staining for protein bands
and Western blots. Between 5 and 15 μL of sample were mixed
with 2x Novex Tricine SDS Buffer (Life Technologies, Carlsbad, CA
LC1676) in the presence of 5% BME. The samples were boiled for 10
min and loaded on 4–20% SDS-PAGE gel for electrophoresis. For
protein staining, the gels were then fixed and stained with SYPRO
Ruby solution (Life Technologies S-12000) overnight. For Western blots,
the gels were transferred to PVDF membrane using the iBlot dry blotting
system. Band detection was performed using the Li-Cor Odyssey Fc (Li-Cor
Biosciences, Inc., Lincoln, NE) after reaction with ECL Luminata Forte
(EMD Millipore, Billerica, MA).
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10

Western Blot Analysis of Protein Samples

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Samples were lysed in BEX Lysis buffer (25 mM Tris pH 8.0, 20 mM NaCl, 0.6% w/v Deoxycholate, 0.6% Igepal CA-630) containing 1x HALT protease and phosphatase inhibitor cocktail (Pierce) and centrifuged for 15 min at 4°C and >13,000 g. Lysates were electrophoresed under denaturing conditions using NuPage Novex Bis-Tris 4-12% gradient gels and MES running buffer (both Invitrogen) according to the manufacturer's instructions. Proteins were transferred onto PVDF membranes (Roche) by wet blot using XCell II Blot Modules (Invitrogen). Membranes were blocked in 1x RotiBlock (Roth) for 1 h. Incubation with primary antibodies was performed overnight at 4°C in 1x RotiBlock. On the next day, after three 10 min washing steps in PBS-T, blots were incubated with HRP-coupled secondary antibodies for 1 h at room temperature. After three washing steps in PBS-T, blots were analyzed using the LAS-4000 CCD imager (GE Healthcare) and Luminata forte ECL (Millipore). Densitometric analysis was performed using ImageQuantTL (GE Healthcare).
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