The largest database of trusted experimental protocols

Zeba spin 7k mwco

Manufactured by Thermo Fisher Scientific

The Zeba Spin 7K MWCO is a desalting and buffer exchange column designed for rapid purification of proteins, peptides, and other biomolecules. It features a 7,000 molecular weight cutoff (MWCO) to efficiently remove salts, buffers, and other small molecules from samples while retaining the target molecules.

Automatically generated - may contain errors

5 protocols using zeba spin 7k mwco

1

Glycan Modification on Anti-PSA Antibody

Check if the same lab product or an alternative is used in the 5 most similar protocols
Glycan present on anti-PSA antibody was oxidized by using a slightly modified mild chemical oxidation procedure as described previously (Chen et al., 2007 (link)). Shortly, monoclonal anti-fPSA (c = 2 mg mL-1) was diluted by 150 mM NaIO4 in 150 mM sodium acetate pH 5.5 solution down to 0.1 mg mL-1 and incubated in the dark for 30 min at 4 °C. After a desalting procedure with previously equilibrated desalting columns (Zeba spin 7 K MWCO, Thermo Scientific), 2mM solution of propionic acid hydrazide in 150 mM sodium acetate pH 5.5 was added to the oxidized anti-fPSA in 1+1 ratio. The mixture was incubated in the dark for 2 h at RT. After the desalting procedure, the oxidized antifPSA (with concentration of 0.05 mg mL-1) was stored in the form of aliquots at −80 °C. Standard enzyme-linked lectin binding assay (ELLBA, according to protocols published in our previous work (Chocholova et al., 2018a (link); Chocholova et al., 2018b ) revealed successful glycan oxidation and its modification by propionic acid hydrazide suppressing lectin binding.
+ Open protocol
+ Expand
2

pH and Redox Dependency of K28 Toxin

Check if the same lab product or an alternative is used in the 5 most similar protocols
To study the pH and redox dependence of K28 toxin with respect to its in vivo killing activity and subunit structure, toxin samples were mixed with 1 M Tris/HCl buffer of different pH, final pH was measured with a microelectrode, and samples were subsequently used for in vivo toxicity and Western analysis. Where indicated, pH was shifted by buffer exchange through desalting columns (Zeba Spin 7K MWCO; Thermo Scientific) or by dialysis. In experiments that included redox-active chemicals, reactions were started by exchange buffer containing chemicals through desalting columns. After incubation at 20°C for 1 h, the chemicals were removed through dialysis. Recombinant Pdi1p was purchased from MCLAB. Reduced Pdi1p was prepared by incubation with immobilized TCEP (Thermo Scientific). Detailed procedures for the pH shift experiments and buffer exchanges are depicted in Supplemental Figure S3.
+ Open protocol
+ Expand
3

Quantifying ZIKV Antibody Binding Affinity

Check if the same lab product or an alternative is used in the 5 most similar protocols
The binding affinity of purified ZIKV E or ZIKV DIII protein with ZIKV mAbs was monitored by BLI using an Octet-Red96 device (Pall ForteBio). Briefly, 100 μg of each antibody was mixed with biotin (EZ-Link-NHS-PEG4-Biotin, Thermo Fisher) at a molar ratio of 20:1 biotin:protein and incubated at room temperature for 30 min. The unreacted biotin was removed by passage through a desalting column (5 ml Zeba Spin 7K MWCO, Thermo Fisher). The antibodies were loaded onto streptavidin biosensors (ForteBio) until saturation, typically 2 μg/ml for 3 min, in 10 mM HEPES, pH 7.4, 150 mM NaCl, 3 mM EDTA, and 0.005% P20 surfactant with 3% BSA. Association and dissociation were measured at 25°C for all mAbs. The real-time data were analy zed using Biaevaluation 4.1 (GE Healthcare). Association and dissociation profiles, as well as steady-state equilibrium concentration curves, were fitted using a 1:1 binding model.
+ Open protocol
+ Expand
4

Characterization of Mxra8 Binding to CHIKV VLP

Check if the same lab product or an alternative is used in the 5 most similar protocols
Binding of Mxra8 and anti-Mxra8 mAbs to captured CHIKV VLP was monitored in real-time at 25°C using an Octet-Red96 device (Pall ForteBio). CHK-265 (100 μg) was mixed with biotin (EZ-Link-NHS-PEG4-Biotin, Thermo Fisher) at a molar ratio of 20:1 biotin:mAb, incubated at room temperature for 30 min, then unreacted biotin was removed by passage through a desalting column (5 mL Zeba Spin 7K MWCO, Thermo Fisher). Biotinylated-CHK-265 was loaded onto streptavidin biosensors (ForteBio) until saturation, typically 10 μg/ml for 2 min, in 10 mM HEPES (pH 7.4), 150 mM NaCl, 3 mM EDTA, and 0.005% P20 surfactant with 1% BSA. CHIKV VLP was then added for 5 min. The biosensors then were dipped into wells containing 1 μM Mxra8 alone or with 1μM of hamster anti-Mxra8 mAbs (1G11.E6, 1H1.F5, 3G2.F5, 4E7.D10, 8F7.E1, or an isotype control mAb) for 5 min, followed by a 5-min dissociation.
+ Open protocol
+ Expand
5

Binding Affinity Measurement of NA

Check if the same lab product or an alternative is used in the 5 most similar protocols
The binding affinity of NA with 1G05 and 2E01 Fabs was measured by BLI with Octet-Red96 instrument (ForteBio) as described previously (Ellebedy et al., 2020 (link)). The NA tetramer was randomly biotinylated (EZ-Link-NHS-PEG4-Biotin, Thermo Fisher), and excess biotin was removed by a desalting column (0.5 mL Zeba Spin 7K MWCO, Thermo Fisher). Briefly, for BLI monitoring, the biotinylated NA protein were loaded onto streptavidin biosensors (ForteBio), at 5 μg/mL for 2 min in HBS-EP buffer (10 mM HEPES pH 7.4, 150 mM NaCl, 3 mM EDTA, and 0.005% P20 surfactant) with 1% BSA. Five 3-fold serial dilutions of Fab samples were used per kinetics assay. The real-time data of BLI were recorded at 25°C and processed using Biaevaluation 3.1 (GE Healthcare). The 1:1 binding model was employed for the association and dissociation rate constants analyses and steady-state equilibrium concentration curves fitting. The t1/2 value of each Fab was then calculated using the formula t1/2=ln2/Kd, where Kd represents the dissociation rate constant.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!