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4 protocols using spa 827

1

Immunofluorescence Staining of NIT-1 Cells

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The following antibodies were purchased: insulin (L6B10, Cell Signaling Technology, Danvers, MA, USA and sc-9168, Santa Cruz, California CA, USA), GM130 (cis-Golgi network staining, 610822, BD Transduction Laboratories, New York, NY, USA), FLAG (F-1804, Sigma, St Louis, MO, USA), HA (anti-HA high affinity 3F10, Roche, Basel, Switzerland), KDEL (ER staining, SPA-827, Stressgen, Victoria, BC, Canada), and Alexa Fluor-conjugated secondary antibodies (Thermo Fisher, Rockford, IL, USA). Mouse pancreas-derived NIT-1 cells (purchased from ATCC® CRL-2055TM, Manassas, VA, USA) were maintained as described previously18 (link). Briefly, the cells were plated at a density of 1.5–3.0 × 106 cells/60-mm dish, and the medium (F-12K, Kaighn’s Modification of Ham’s F-12 Medium, 2 mmol/l L-arginine and 7 mmol/l glucose) after 48 h of culture medium was exchanged to fresh medium after 48 h of culture.
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2

Western Blot Analysis of Cellular and Renal Proteins

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Western blots were performed with cell lysates, as well as renal tissue lysates, all in triplicate. 4X SDS lysis buffer with protease and phosphatase inhibitors was used for cell or tissue lysis. A protein assay was performed prior to Western blotting (DC Protein Assay; BioRad). A 15% SDS-PAGE gel was used to probe for acetyl H3, and 10% SDS-PAGE gels were used for all other proteins. Primary antibodies were detected using a horseradish peroxidase-bound secondary antibody and enhanced chemiluminescence. Acetyl H3 (#06–599; Millipore) was used at a dilution of 1:1000, CHOP (sc-7351; Santa Cruz) was used at a dilution of 1:200, β-actin (#66009–1; ProteinTech) was used at a dilution of 1:5000, and GAPDH (#2118; Cell Signaling) was used at a dilution of 1:1000. GRP78 was measured using a KDEL antibody (SPA-827; Stressgen), which binds to the KDEL amino acid sequence in GRP78. It was used at a dilution of 1:1000. Anti-mouse and anti-rabbit secondary antibodies were used at 1:5000 (BioRad). Results were densitometrically quantified using ImageLab software, and each protein was expressed as a ratio of β-actin or GAPDH loading control.
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3

Immunofluorescence Staining of Pancreatic Cells

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The following antibodies were purchased: β-actin (sc-47778, Santa Cruz Biotechnology, Santa Cruz, CA, USA), glyceraldehyde 3-phosphate dehydrogenase (ab9485, Abcam, Cambridge, UK), insulin (L6B10, Cell Signaling Technology, Danvers, MA, USA, and sc-9168, Santa Cruz Biotechnology), UGGT1 (14170–1-AP, Proteintech, Rosemont, IL, USA; sc-374565, Santa Cruz Biotechnology; and ab13520–50, Abcam), KDEL (ER staining, SPA-827, Stressgen, Victoria, BC, Canada), gp96 (2104S, Cell Signaling Technology), FLAG (F-1804, Sigma, St. Louis, MO, USA), GM130 (cis-Golgi network staining, 610822, BD Transduction Laboratories, New York, NY, USA), and Alexa Fluor-conjugated secondary antibodies (Thermo Fisher, Rockford, IL, USA). Mouse pancreas-derived NIT-1 cells (CRL-2055™ purchased from ATCCR, Manassas, VA, USA) were maintained as described previously15 (link),23 (link). HEK293FT cells were maintained with DMEM+10% FCS15 (link),23 (link).
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4

Proteomic Analysis of Ethanol-Induced Liver Damage

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Microsomal fractions isolated from the livers of both control and ethanol-fed mice were subjected to two-dimensional gel electrophoresis (2D-PAGE) on IPG strips (pH 3–11) and separated on 7cm gels. Proteins were then transferred to a Hybond-P membrane (GE Healthcare, Buckinghamshire, UK) and then blocked for 30 min with a tris-buffered saline solution containing 1% Tween-20 (TBST) and 5% non-fat dry milk (NFDM). Membranes were probed with primary antibodies directed against either KDEL (which recognizes GRP78 and GRP58) (SPA-827, Stressgen, Ann Arbor, MI), or custom antibodies directed against 4-HNE or 4-ONE modified proteins (Bethyl Laboratories, Montgomery, TX). A horseradish peroxidase conjugated secondary (Jackson Labs, Bar Harbor, ME) was then applied and membranes were developed using ECL-Plus Reagent from GE Healthcare. Chemiluminescence was visualized using a Storm 860 scanner from Molecular Dynamics (Sunnyvale, CA).
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