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4 protocols using anti ccr7 apc

1

Identifying Subsets of T Cells

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The negatively sorted
CD69CD25HLA-DRblast and non-blasts were stained with anti-CD45RO-FITC, anti-CD45RA-PE-Cy7 (BD
Biosciences), anti-CCR7-APC, eFluor-780, anti-CD27 PE-Cy5 (all eBioscience) and
anti-CD4-PE-Texas Red (Invitrogen), and analyzed using a flow cytometer
(LSRFortessa™, BD Biosciences).
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2

Multiparameter Flow Cytometry Analysis

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Flow cytometry analyses were performed on an LSR Fortessa flow cytometer (BD Biosciences). Automatic compensation was performed using CompBeads (BD Biosciences). Fluorescence minus one controls were performed to define gates of positivity. Following antibodies and reagents were used: biotinylated anti-CD11b, anti-CD33 PE-Cy7, anti-HLA-DR PE-Cy7, anti-CD15 FITC, anti-CD8 PE, anti-CD4 APC-Hy, anti-CD127 FITC, anti-CD16 FITC, anti-CD45 RO PE, andi-CD45 RA FITC, anti-CD95 PD-CF594, anti-PD-1 APC, anti CD62L APC (BD Biosciences); anti-CD14 APC-Cy7, anti-CD3 BV 605, anti-CD3 PE/Dazzle 594, anti-CD4 PE-Cy7, anti-CD4 PerCPCy5.5, anti-CD56 PE-Cy7, andi-CD28 FITC, anti-CD27 APC, anti-ICOS APC-Cy7, anti-CD137 PE, anti-CD137 APC, Zombie Yellow Fixable Viability Kit (BioLegend); eFluor 450 labeled streptavidin, anti-CD8 APC-H7, anti-Foxp3 APC, anti-CCR7 APC, anti-TIM3 eFluor 450, anti-TIGIT PE, anti-LAG3 PerCPeFluor710 (eBioscience), anti-CD25 PE (Myltenyi Biotec) and anti-OX40 APC (R&D Systems).
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3

T cell Receptor Imaging and Activation

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The reagents used in our experiments included: OVA(323–339) (Sigma-Aldrich, St Louis, MO, USA), thapsigargin (TG, stock 1 mM in DMSO, Molecular Probes, Invitrogen, USA), cytochalasin D and nocodazole (Calbiochem, Merck KGaA, Germany). Recombinant murine interferon gamma (IFN-γ) was purchased from Peprotech (Rocky Hill, NJ, USA). For live cell imaging, H57-597-Fab-TCRαβ-Alexa Fluor 647 was purchased from Invitrogen to label TCR as a non-blocking antibody [22 (link)]. For calcium imaging, Calcium Crimson™ was purchased from Invitrogen. The following antibodies (Abs) were used for immunofluorescence: Texas Red-X phalloidin for anti-F-actin, MitoTracker® Green FM (Molecular Probes, Invitrogen, USA), anti-PLCγ1 (sc81, Santa Cruz Biotechnology, Santa Cruz, CA, USA), polyclonal rabbit anti-PKC-θ (sc212, Santa Cruz Biotechnology), anti-ZAP-70 (Y319, Abcam, Cambridge, MA, USA), anti-ORAI1 (ab59330, Abcam, Cambridge, MA, USA) and anti-PMCA (5 F10, Abcam, Cambridge, MA, USA), Dylight 405-conjugated goat anti-rabbit IgG (Jackson ImmunoResearch Laboratories), Alexa Fluor 555-conjugated goat anti-rabbit IgG (Invitrogen). The following Abs were used for flow cytometry: anti-MHC-II (I-Ab)-FITC, antiCD80-PE, anti-CD86-APC and anti-CCR7-APC (all from eBioscience).
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4

Comprehensive Immune Cell Profiling

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Whole blood samples were labelled with anti CD3 PE, anti CD4 PerCP, anti CD8 APC-H7 (all from BD Biosciences, San Jose, California), anti CD45RA FITC (BD Pharmingen, San Jose, California) and anti CCR7 APC (eBiosciences, San Diego, California). The following classification was used for different cell types; T helper (CD3+CD4+) and T cytotoxic (CD3+CD8+). The following additional criteria was used for the different subsets; naïve (CD45RA+CCR7+), central memory (CD45RACCR7+), effector memory (CD45RACCR7) and terminally differentiated effector cells (CD45RA+CCR7).
For the B cells, whole blood was labelled with anti CD19 APC, anti CD21 PE-cy5 (all from BD Pharmingen, San Jose, California), anti CD10 FITC and anti CD27 PE (eBiosciences, San Diego, California). B cells were identified as CD19+ and subpopulations of naïve as CD19+CD27CD21hiCD10, classical memory as CD19+CD27+CD21hiCD10, activated memory as CD19+CD27+CD21loCD10, atypical memory CD19+CD27CD21loCD10 and immature transitional as CD19+CD27CD21loCD10+.
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