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Ptm 105rm

Manufactured by PTM Biolabs
Sourced in China

The PTM-105RM is a laboratory instrument designed for the analysis of post-translational modifications (PTMs) in proteins. It utilizes high-performance liquid chromatography (HPLC) and mass spectrometry (MS) technologies to separate, detect, and characterize various PTM types, such as phosphorylation, acetylation, and glycosylation. The PTM-105RM provides researchers with a reliable and efficient tool for the in-depth study of protein regulatory mechanisms and cellular signaling pathways.

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3 protocols using ptm 105rm

1

Protein Expression Analysis of Cellular Signaling

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The cells and mouse tissues were lysed using RIPA buffer (#89901, Thermo fisher Scientific) supplemented with PhosSTOP and complete protease inhibitors (Merck, Beijing, China). The protein samples were subjected to 12.5% SDS-PAGE and transferred to a polyvinylidene fluoride membrane (162-0177, BioRad, Shanghai, China). Blots were probed with appropriate primary antibodies against VCAM-1 (ab134047, Abcam, Cambridge, UK), E-selectin (20894-1-AP, Proteintech, Shanghai, China; sc-137054, Santa Cruz, California, USA), Phosphorylated ACLY (Ser455, 4331, CST, Danvers, MA), ACLY (13390, CST), Raptor (48648, CST), Rictor (9476, CST), phosphorylated FoxO1 (Ser256, 84192, CST), FoxO1 (2880, CST), acetylated FoxO1 (Lys294, AF2305, Affinity, PA, USA), MYC (9402, CST), FASN (3180, CST), ACSS2 (3658, CST), ACC1 (4190, CST) (MA, USA), and pan-acetyl-lysine (PTM-105RM, PTM Biolabs, Shanghai, China) at 4 °C overnight. The blots were then incubated with the appropriate secondary antibodies (1:5000, proteintech) and detected using a horseradish peroxidase substrate (WBLUF0500, Millipore, USA). For internal controls of equal loading, the blots were also stripped with stripping buffer (100 mmol/l 2-mercaptoethanol, 2% SDS, 62.5 mmol/l, Tris pH 6.8) and reprobed with ACLY, FoxO1, or GAPDH antibodies.
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2

Acetylation-Modified Protein Western Blot Analysis

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After homogenization and
protein concentration determination, three separate samples from each
group with adequate and similar protein concentrations were selected
for acetylation-modified protein Western blot filter analysis. Twenty
micrograms of protein lysate was separated by 12% SDS-PAGE and electrotransferred
onto poly(vinylidene fluoride) membranes (Merck Millipore, Tullagreen,
Ireland) at 300 V, 200 mA for 110 min. The membrane layer was closed
with 5% skimmed milk powder at 4 °C for 1 h. The membranes were
then incubated with an antiacetylation antibody (1:500; PTM-105RM,
PTM Bio, Hangzhou, China) overnight. The membranes were washed with
Tris-buffered saline with Tween-20 (TBST) three times for 10 min each.
Afterward, the membranes were incubated with horseradish peroxidase
(HRP)-coupled secondary antibody (1:10 000; 31460, Thermo)
for 2 h at 4 °C. After three more washes with TBST, the protein
bands were visualized with the ECL kit.
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3

Western Blot Analysis of Protein Modifications

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The cell lysates were separated via sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene fluoride (PVDF) membranes (ISEQ00010, Millipore). Subsequently, the membranes were blocked with 5% skimmed milk and incubated overnight at 4 °C with primary antibodies. The following antibodies were used: anti-SIRT5 (1:1000 dilution; 8782 S, Cell Signaling Technology, Danvers, MA, USA), anti-HINT1 (1:1000 dilution; 67583-1-Ig, Proteintech, Rosemont, IL, USA), anti-Succinyllysine (1:1000 dilution; PTM-401, PTM Bio, Hangzhou, China), anti-Acetyllysine (1:500 dilution; PTM-105RM, PTM Bio), anti-GFP (1:5000 dilution; 50430-2-AP, Proteintech), anti-Flag (1:5000 dilution; 80010-1-RR, Proteintech), and anti-β-Actin (1:5000 dilution; AB0035, Abways, Shanghai, China). Then PVDF membranes were incubated with HRP-conjugated goat anti-rabbit or mouse antibodies (1:5000 dilution; AB0101 and AB0102, Abways) and thoroughly washed. The protein bands were visualized using the ECL chemiluminescence detection kit (WBKLS0500, Millipore), and band intensity was quantified using ImageJ software.
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