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44 protocols using dual glo

1

Dual Luciferase Assay for Gene Regulation

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The Dual Glo™ luciferase assay system (Promega) is designed for the functional analysis of promoter or 3′UTR regions. Regulation deriving from transcription factors as well as from posttranscriptional modifications by micro-RNAs can be detected. It is based on dual transfection with two luciferase-active vectors, one containing the corresponding construct and one untransfected vector for the purpose of transfection normalization. The reagents Dual Glo® and Stop&Glo® (Promega) are added sequentially to measure the activity of luc2 and hRluc.
Luciferase activity was measured 24 h after transfection using a 96-well luminometer (Berthold Technologies GmbH & Co. KG, Bad Wildbad, Germany). Measurement periods were 1 sec for luc2 activity and 5 sec for hRluc activity. The background activity was subtracted prior to evaluation. Firefly luciferase activity was normalized for Renilla luciferase activity as recommended by the manufacturer (Promega).
The assessment was performed in duplicate for each construct and control. In total, six runs were carried out.
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2

Luciferase Reporter Assay Protocol

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Luciferase activity was analyzed 72 h post-transfection of luciferase-encoding reporters using DualGlo (Promega), essentially as previously described (26 (link)). Firefly luciferase (FFL) activities were normalized by Renilla (RL) activities yielding relative activities (RLU). RLU ratios were normalized to control populations and the luciferase empty vector control.
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3

NF-κB Transcriptional Activity Assay

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Luciferase assays were performed using Dual-Glo (Promega). Virus containing the pGreenFire NF-κB reporter plasmid was purchased from System Biosciences and used to transduce TMD8 cells. Cells were treated for 18 hours before lysis. 293T cells were transfected with luciferase vector using Fugene 6. Twenty four hours after transfection, cells were treated with compounds for 4 hours before lysis.
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4

Characterization of MEISi-1 and MEISi-2 Small Molecules

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MEISi-1 (MW: 388.467) (Cas# 446306-43-0) and MEISi-2 (MW: 306.32) (Cas#2250156-71-7) are now available by Meinox Pharma Technologies (www.meinoxtech.com, Cat# MEISi1-25mg and Cat# MEISi2-25mg). Lyophilized MEISi-1 and MEISi-2 small molecules were dissolved in sterile dimethyl sulfoxide (DMSO, Calbiochem, 317275). Luciferase reporter assays were carried out as we have done previously13 (link),14 (link),16 (link),17 (link). Briefly, p21-pGL2 (2 µg) (MEIS-p21-Luc reporter17 (link)) or Hif-pGL2 (MEIS-HIF-Luc Reporter or PBX-Luc reporter (ref.13 (link),14 (link),16 (link)) was co-transfected with Meis1 expression vector pCMVSPORT6-Meis1 or Pbx1 pCMVSPORT6-Pbx1 (OpenBiosystems, 400 ng), pGL2 (filler) into HEK293 cells in six-well plates using poliethylenimine transfection reagent (SantaCruz, Cat.No. Sc-360988A). DMSO (control, 0.5%), MEISi-1 and 2 were tested in three different doses (0.1, 1 and 10 µM) in triplicates. After 48 hours of transfection, the cell lysate was processed for luciferase activity using the luciferase reporter system, according to the manufacturer’s instructions (Promega Dual-Glo, Cat.No. E2920). Luciferase measurements were done with Luminoskan Ascent Microplate (Thermo Lab System) and were calculated as relative light units normalized to transfection control/protein content.
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5

Measuring Yeast Protein Synthesis Kinetics

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Yeast cells transformed with a plasmid encoding for RNA2-Rluc reporter (pJJ-16) were grown as described in Yeast Cultures section. When they reached an OD600 of 0.5, protein synthesis was stopped with 0.5 mg/ml cycloheximide. Renilla luciferase activity assay (Dual-Glo®, Promega) was used following the protocol provided by the manufacturer. Samples were collected at different intervals during 3 h by directly transferring 10 µl of culture to 100 µl of 1x Passive Lysis Buffer. Only 10 µl of the lysate were used (the rest was stored at −80 °C) and 200 µl of LARII-StopGlo solution (1:1) was subsequently added. FB12 Luminometer was employed to read Luciferase activity, with 5 s of equilibration time and 5 s of measurement time. The values obtained were corrected by the corresponding OD600 and were represented relatively to the first time-point (t = 0). This protocol was adapted from ref. 46 (link).
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6

Cell-Based Assay for PCSK9 Inhibition

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The mRNA reporters used in cell reporter assay contained the 5’-untranslated region (5’-UTR) of β-globin (HBB) followed by either the stalling sequence of PCSK9 (codons for amino acids 1–35), the p2A sequence [50 (link)] and Renilla luciferase (PCSK9(1–35)-Rluc), or by just the Firefly luciferase sequence (Fluc). Briefly, 125 μL of K562 cells were seeded in 96-well plates at ~0.4x106 cells/mL and incubated overnight (37°C, 5% CO2). The test reporter (PCSK9(1–35)-Rluc) and the control reporter (Fluc) were co-transfected (0.05 μg per mRNA per well) in K562 cell lines using JetMessenger mRNA transfection kit (Polyplus, 150–01) according to the manufacturer's instructions. Serial dilutions of 200x PF8503 were prepared in DMSO and added to the cells immediately after transfection (0.5% DMSO final per well). Rluc and Fluc luminescence signals were measured 7–8 hr after transfection with Dual-Glo (Promega, E2920) on a Veritas microplate luminometer (Turner Biosystems). The normalized signal for each well (Rluc/Fluc) was calculated and normalized to the signal of non treated (DMSO only) wells. IC50 values were calculated using GraphPad Prism version 7.00 for Mac (GraphPad Software, La Jolla California USA, www.graphpad.com).
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7

Fndc4 Promoter Regulation by TGF-β1

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McArdle cells were transfected with a pGl3 reporter vector (Promega) containing the mouse Fndc4 upstream promoter region using Lipofectamine 2000 (Life Technologies) as transfection reagent. After 8 h, cells were treated with TGF-β1 (20 ng ml−1; Peprotech, Stockholm, Sweden) and/or SB-431542 (20 μM; Merck Millipore) for 20 h. The luciferase assay (Dual-Glo, Promega) was performed according to the manufactures instructions. Values are reported relative to the non-treated control group.
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8

SMN2 Reporter Assay Protocol

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The SMN2 reporter cell line [14 (link), 15 (link)] was cultured in high-glucose DMEM supplemented with 10% (v/v) fetal bovine serum (FBS) and 1X Penicillin/Streptomycin. Reporter cells media was supplemented with hygromycin during maintenance. All cells were maintained at 37°C and 5°C CO2. After seeding in 96-well white tissue culture plates at 25,000 per well, cells were incubated overnight before being exposed to different doses of compounds or DMSO for 24 hrs. The final DMSO concentration was kept constant at 0.1% (v/v). Firefly and renilla luciferase expression were assayed with DualGlo (Promega E2920) and measured on a PHERAstar FS microplate reader (BMG Labtech). Relative light units are normalized to DMSO control and expressed as a percentage.
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9

NF-κB Activation Assay with Kallistatin

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For the luciferase reporter assay, the cells were co-transfected with the NF-κB promoter-driven luciferase reporter (0.2 μg) and 0.01 μg of Renilla luciferase-expressing plasmid (pRL-TK; Promega, Madison, WI, USA) using the GeneJammer transfection reagent (Stratagene, La Jolla, CA, USA). Twenty-four h after the transfection, the cells were treated with LPS for 24 h with or without a 1-h pretreatment of kallistatin (0.5 μM) and NAC (10 mM). Cells were then lysed and harvested for luciferase and Renilla measurement using a luciferase assay system (Dual-Glo; Promega). For each lysate, the firefly luciferase activity was normalized to the Renilla luciferase activity to assess transfection efficiencies.
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10

Luciferase Assay of TFRC Constructs

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The TFRC constructs were synthesized at GenScript and cloned into the pMIRGLO luciferase vector (Promega). Mouse L-M (TK-) fibroblasts (ATCC, CCL-1.3) were grown in DMEM (Life Technologies, 11995–065) containing 10% fetal bovine serum (FBS) and plated at 2000 per well in a 96 well plate and transfected 8 h later with 30 ng of vector using 0.3 µL lipofectamine 2000 (Life Technologies). Media was replaced 14 h after transfection. DFO or FAC was added 8–10 h later and the plates incubated a further 12–14 h as indicated. Dual-Glo (Promega) reagents were used to assay luciferase activity and quantification was done with a luminometer (Tecan). A minimum of three independent transfections were performed for each TFRC construct, and each transfection was assayed in triplicate.
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