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7 protocols using g2654

1

Detailed Pancreatic Tissue Analysis Protocol

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At the end of the follow-up period, mice were sacrificed, pancreata were
harvested, fixed, and embedded in paraffin 6 h post-injection with BrdU (100
mg/kg/bw). Sections were stained using antibodies to BrdU (Dako, M0744, 1:100),
Ki67 (Dako, M7240, 1:100), phosphohistone H3 (Millipore, 06–570, 1:250),
or insulin (Abcam, ab7842, 1:500), glucagon (Sigma, G2654, 1:8000), somatostatin
(Abcam, ab30788, 1:1000), β2M (Abcam, ab87483, 1:80), serum anti-ZnT8
(c-term), 1:500, serum anti-phogrin (C-term), 1:250 (gift from H. Davidson, Univ
Colorado) and appropriate secondary antibodies and counterstained with DAPI
(Sigma, D9564, 1:6600). Cell death was detected by TUNEL assay (ApopTag S7100;
Chemicon). At least 1,000–2,000 β-cell nuclei were counted per
animal, and data were expressed as a percentage of BrdU+, Ki67+, pHH3+ or TUNEL+
β-cells. Insulitis was evaluated as reported previously38 (link). β-cell mass was
evaluated by point-counting morphometry on immunofluorescence-stained sections
of the pancreas5 (link).
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2

Immunostaining of Pancreas Samples

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Pancreas samples were harvested from Hadhlox/lox, SCHADKO, and β-SKO mice and immediately fixed in 4% paraformaldehyde solution overnight at 4 °C. Samples were then stored in PBS at 4 °C until processing and paraffin embedding. Immunostaining (5-μm tissue sections) for SCHAD and insulin was performed as previously described (14 (link)). For glucagon and SST staining, the sections were incubated overnight at 4 °C with mouse monoclonal anti-glucagon antibody (Sigma-Aldrich, G2654; 1:8000) or rat monoclonal anti-SST antibody (Abcam, ab30788; 1:500), followed by incubation for 1 h at room temperature with secondary antibody 1:400 from Jackson ImmunoResearch Laboratories (glucagon: #715-586-151; SST: #712-586-153).
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3

Pancreas Tissue Immunohistochemistry and Immunofluorescence

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Pancreas tissues were separated, fixed, and embedded in paraffin [21 (link)]. Serial sections were deparaffinized with dimethylbenzene, and antigen retrieval was conducted using citrate buffer solution. The slides were incubated with 3% hydrogen peroxide for 15 min and then blocked with 10% goat serum for 1 hour at room temperature. The slides were incubated with primary antibodies targeting Ngn3 (AVIVA SYSTEMS BIOLOGY, OAAB15617), cleaved Notch1 (Abcam, ab8925), insulin (Abcam, ab7842), NKX6-1 (Cell Signaling Technology, #54551), glucagon (Sigma, G2654), PDX-1 (Abcam, ab47267), Ki67 (Abcam, ab15580), and caspase12 (Abcam, ab62484) at 4°C in a refrigerator overnight. For immunohistochemistry, the GTVision™+ Detection System/Mo&Rb (Gene Tech, GK6005) was used to examine the signal based on the guidelines. For immunofluorescence staining, the signal was detected using FITC-labelled IgG fluorescence.
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4

Profiling Endocrine Cell Composition

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To profile endocrine cell types after sorting, both sorted and unsorted islet cells were seeded in Matrigel-coated flat-bottom 96-well plates (1000 cells/200 μL/well) immediately after FACS. Next day (day 1), the cells were fixed in 4% PFA (Wako) for 15 min at room temperature and washed with PBS. Cells were then permeabilized and blocked with PBS containing 0.25% Triton-X and 5% donkey serum (Sigma) for 1 hr at room temperature. Primary antibodies C-peptide (DSHB, 1:200) and glucagon (MilliporeSigma, G2654, 1:10,000) diluted in antibody dilution buffer (Abcam) were added to the wells for overnight at 4°C. Cells were washed three times with PBS and the secondary antibody, diluted in PBS, was added to the wells for 1 hr at room temperature. Cells were washed three times with PBS and DAPI (Sigma) was added to the wells. Images were captured using an Olympus IX51 Inverted Microscope. For estimation of cell composition, ~4000 cells were counted per donor, and data were expressed as percentage of hormone+ cells.
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5

Detailed Pancreatic Tissue Analysis Protocol

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At the end of the follow-up period, mice were sacrificed, pancreata were
harvested, fixed, and embedded in paraffin 6 h post-injection with BrdU (100
mg/kg/bw). Sections were stained using antibodies to BrdU (Dako, M0744, 1:100),
Ki67 (Dako, M7240, 1:100), phosphohistone H3 (Millipore, 06–570, 1:250),
or insulin (Abcam, ab7842, 1:500), glucagon (Sigma, G2654, 1:8000), somatostatin
(Abcam, ab30788, 1:1000), β2M (Abcam, ab87483, 1:80), serum anti-ZnT8
(c-term), 1:500, serum anti-phogrin (C-term), 1:250 (gift from H. Davidson, Univ
Colorado) and appropriate secondary antibodies and counterstained with DAPI
(Sigma, D9564, 1:6600). Cell death was detected by TUNEL assay (ApopTag S7100;
Chemicon). At least 1,000–2,000 β-cell nuclei were counted per
animal, and data were expressed as a percentage of BrdU+, Ki67+, pHH3+ or TUNEL+
β-cells. Insulitis was evaluated as reported previously38 (link). β-cell mass was
evaluated by point-counting morphometry on immunofluorescence-stained sections
of the pancreas5 (link).
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6

Comprehensive Immunostaining Protocol

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These antibodies were used in this study for immunohistochemistry; Primary antibodies were goat anti-WNT4 (R&D system, AF475, 1:100) (Fig. 1g), rabbit anti-WNT4 (Bioss Antibodies, BS-6134R, 1:100)(Supplementary Fig. 3), guinea pig anti-Insulin (DAKO, A0564, 1:100), mouse anti-Glucagon (Sigma, G2654, 1:800), chicken anti-GFP (Abcam, ab13970, 1:1000), rabbit anti-Ki67 (Abcam, ab16667, 1:100), mouse anti-active beta-catenin (Millipore, 05-665, 1:100), rabbit anti-pMLC (Cell Signaling Technology, 3674, 1:100). Secondary antibodies were donkey anti-mouse Alexa FluorTM 568 (Thermo Fisher, A10037, 1:1000), donkey anti-mouse Alexa Fluor® 647 (Jackson ImmunoResearch Europe Ltd, 715-605-150, 1:800), donkey anti-chicken Alexa Fluor® 488 (Jackson ImmunoResearch Europe Ltd, 703-545-155, 1:800), goat anti-chicken Alexa FluorTM 488 (Thermo Fisher, A-11039, 1:1000), donkey anti-goat Alexa Fluor® 488 (Abcam, ab150129, 1:1000), donkey anti-guinea pig Texas red (Abcam, ab6906, 1:300), donkey anti-guinea pig Biotin (Jackson ImmunoResearch Europe Ltd, 706-065-1480, 1:400), donkey anti-rabbit Biotin (Jackson ImmunoResearch Europe Ltd, 711-065-152, 1:200), Streptavidin Alexa Fluor® 647 (Jackson ImmunoResearch Europe Ltd, 016-600-084, 1:1000). Nuclei were stained with DAPI (Sigma, D9542-1MG, 1:10000).
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7

Zebrafish Larval Immunostaining Protocol

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Larvae were harvested at 7 dpf, fixed for 1 to 2 h at room temperature in 4% paraformaldehyde (PFA)/1% DMSO in PBS, then washed three times for 5 min each with 1× PBS/0.1% Tween 20. To improve access of antibodies to internal structures, the ventral skin was cut open. Larvae were incubated in blocking buffer (1% DMSO, 1% sheep serum, 1% BSA, 1% Triton X-100 in 1× PBS) for at least 60 min at room temperature. Samples were then incubated overnight at 4°C with primary antibody, washed and then reblocked and incubated in secondary antibody overnight at 4°C. Primary antibodies were: mouse anti-GFP (Roche, 11814460001, 1:100), mouse anti-glucagon (Sigma, G2654, 1:100), mouse anti-2F11 (Abcam, ab71286, 1:100), rabbit anti-somatostatin (Dako, A0566, 1:200), guinea pig anti-insulin (Dako, A0564, 1:200), rabbit anti-GFP (antikoerper, ABIN110592, 1:200) and rabbit anti-dsRed (Clontech, 632496, 1:200).
Secondary antibodies were labeled with Alexa Fluor (Invitrogen) and diluted 1:1000. Nuclei were labeled by incubation overnight at 4°C in 100 ng/ml DAPI/1% DMSO in PBS. Phalloidin staining (Alexa Fluor 488 Phalloidin, ThermoFisher, A12379) was performed as described (Goody et al., 2012 (link)).
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