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Ti e confocal microscope

Manufactured by Nikon
Sourced in Japan

The Ti-E confocal microscope is a high-performance imaging system designed for advanced microscopy applications. It features a modular design that allows for customization to meet specific research needs. The microscope provides superior optical performance, delivering high-resolution images with excellent contrast and clarity.

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20 protocols using ti e confocal microscope

1

TGF-β1 Modulates α-SMA Expression

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HLFs were treated without or with 1 ng/mL TGF-β1 for 48 h. Cells were washed and then fixed in 4% paraformaldehyde for 10 min at room temperature, followed by blocking in 10% goat serum in 1 × PBS blocking solution for 1 h at room temperature. Expression of α-SMA by HLFs was visualized with an anti-α-SMA monoclonal antibody (clone 1A4) primary antibody and an Alexa Fluor 488-labeled secondary antibody (A-11001, Life Technologies). The images were obtained with a Nikon Ti-E confocal microscope (Melville, NY, United States). Data are quantified as the percentage of HLFs with α-SMA-positive stress fibers.
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2

Quantification of VANGL2 Localization in NSCs

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Confocal images were obtained on a Nikon TiE confocal microscope using the NIS-Elements software. Quantification of relative immunoreactivity of VANGL2 was performed similarly as previously described for that of GOLPH3 (Xie et al., 2018 (link)). Briefly, Confocal images were converted to TIF files, which were then used for gray value measurement in Adobe Photoshop CS6. Cells from images obtained from at least three embryos were pooled together for each group. To quantify relative VANGL2 immunoreactivity at trans-Golgi for each transfected cell (EGFP+), VANGL2 immunoreactivity at trans-Golgi (indicated by GOLGIN97 immunoreactivity) was compared to the thin layer of VANGL2 immunoreactivity surrounding the nucleus, which was consistent with the pattern of plasma membrane localization at the somata of NSCs.
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3

Quantification of VANGL2 Localization in NSCs

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Confocal images were obtained on a Nikon TiE confocal microscope using the NIS-Elements software. Quantification of relative immunoreactivity of VANGL2 was performed similarly as previously described for that of GOLPH3 (Xie et al., 2018 (link)). Briefly, Confocal images were converted to TIF files, which were then used for gray value measurement in Adobe Photoshop CS6. Cells from images obtained from at least three embryos were pooled together for each group. To quantify relative VANGL2 immunoreactivity at trans-Golgi for each transfected cell (EGFP+), VANGL2 immunoreactivity at trans-Golgi (indicated by GOLGIN97 immunoreactivity) was compared to the thin layer of VANGL2 immunoreactivity surrounding the nucleus, which was consistent with the pattern of plasma membrane localization at the somata of NSCs.
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4

Lysosomal Activity Quantification in MEFs

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MEFs were seeded in SensoPlate™ 24-Well Glass-Bottom Plate at the density of 50,000 cells per well and cultured for 24 h. Then cells were treated with 1X MagicRedTM (ImmunoChemistry Technologies, #937) staining solution for 30 min at 37 °C. Cells were analyzed with a Nikon Ti-E confocal microscope equipped with A1R scan head with spectral detector and resonant scanners using TRITC filter. Images were quantified using Image J.
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5

Perfusion, Cryosectioning, and Immunostaining

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Animals were sacrificed and perfused with phosphate-buffered saline followed by 4% paraformaldehyde. Then, 20 μm sections were prepared on a cryostat. For immunostaining, tissue sections were mounted and blocked with 10% normal goat serum and 1% bovine serum albumin, then incubated with primary antibodies at 4 °C overnight. Images were collected with a Nikon Ti-E confocal microscope equipped with an A1R scan head with a spectral detector and resonant scanners and acquired with Nikon NIS-Elements software.
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6

Mitochondrial Imaging in MEFs

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MEFs were seeded in SensoPlate™ 24-Well Glass-Bottom Plate at the density of 50,000 cells per well and cultured for 4 h. The cells were treated with different concentrations of acetyl-l-carnitine for 20 h. MitoTracker® Green FM (Invitrogen, M7514) was added to cultural medium to make a final concentration of 50 nM MitoTracker® Green FM. Cells were incubated with MitoTracker® Green FM at 37 °C for 30 min; then the medium was removed and washed twice with PBS. Cells were analyzed with a Nikon Ti-E confocal microscope equipped with A1R scan head with spectral detector and resonant scanners using FITC filter. Images were quantified using Image J.
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7

Immunolabeling of Mouse Forebrain Sections

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Forebrain hemispheres of electroporated mouse embryos were harvested as previously described (Xie et al., 2006 (link)). Briefly, the lateral ventricle was exposed by removal of the hippocampal tissue, the remaining forebrain hemisphere was then fixed in 2% paraformaldehyde (prepared in PBS) for 20–30min. Following fixation, the hemispheres were cryoprotected with 20% sucrose (prepared in PBS) and then embedded in Tissue-Tek OCT. Thirty-micron cryosections were prepared from hemispheres and used for immunostaining. Antibodies were diluted in 1×PBS containing 3% bovine serum albumin and 0.2% Triton-X-100. Generally, the primary antibody incubation step was performed at room temperature for overnight, and the secondary antibody incubation step was performed at room temperature for 1h. Secondary antibodies were conjugated with Cy2 (green), Cy3 (red), Cy5 (far red), or DyLight405 (blue). For some of the samples, DAPI was used to label the nucleus. Confocal images were acquired on a Nikon TiE confocal microscope using the NIS-Elements software.
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8

Visualization of Mitochondria and Endoplasmic Reticulum

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The cells were seeded into 15 mm confocal dishes, and immunofluorescence staining was performed after the intervention. MitoTracker Red CMXRos (Life Technologies, Carlsbad, CA, USA), diluted in serum-free medium to 100 nM, was added to the cells, which were then incubated in the dark at 37 °C for 30 min. ER Tracker Blue White DPX dye (Life Technologies, Carlsbad, CA, USA), diluted in serum-free medium to a final concentration of 200 nM, was then added to the cells, which were incubated in the dark at 37 °C for 30 min. Next, the cells were fixed with 4% paraformaldehyde for 15 min and permeabilized using 0.3% after washing three times with PBS. Triton for 15 min, and sealed with 5% BSA for 30 min. Primary antibodies (1:100) were added. The cells were incubated in the dark at 4 °C overnight. DyLight 488 goat anti-rabbit IgG (1:200; A23220; Abbkine, Wuhan, China) was then added, and the cells were incubated in the dark at 37 °C for 1 h. Images were captured using a TiE confocal microscope (Nikon, Tokyo, Japan). A plot profile was generated using ImageJ software to assess the degree of colocalization.
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9

Intracellular Zinc Protoporphyrin IX Uptake

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P. falciparum was cultured at 37 °C under 5% CO2, 5% O2 and 90% N2 in the presence of 20 μM ZnMP for 1 h, and then red blood cells were washed by PBS to remove ZnMP in the medium. ZnMP uptake was examined under a Nikon Ti-E confocal microscope equipped with a ×100 MPLAPON oil objective with the excitation wavelength at 488 nm and the emission spectrum at 550–650 nm.
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10

Immunofluorescence Protocols for Cellular and Spheroid Imaging

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Immunofluorescence in cells was performed following the previous protocol. 61 (link) Briefly, the cells were fixed using 4% paraformaldehyde for 10 min, before being permeabilized with 1% Triton X-100 in PBS and blocked with a blocking solution containing 3% BSA in PBS at room temperature. After that, the cells were incubated for an hour with the primary antibody which was followed by washing with PBST (PBS+0.05% Tween 20). Then Alexa conjugated secondary antibodies were added and incubated for 1 h in the dark. The coverslips were mounted using DAPI containing mounting media. The images were taken in a Zeiss 710 Anisotropy microscope.
The tumorspheres were fixed using chilled methanol for 15 min and then blocking was done using 3% BSA for 1 h at ambient temperature. After that, the remaining spheres were incubated with primary antibodies overnight at a 4-degree temperature. The next day, secondary antibodies were added and mounting was done. Finally, the images were captured in a Nikon Ti-E confocal microscope.
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