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Alexa 488 labeled streptavidin

Manufactured by Thermo Fisher Scientific

Alexa-488-labeled streptavidin is a fluorescently-labeled protein used for detection and localization applications in biological research. It consists of the streptavidin protein conjugated to the Alexa Fluor 488 dye, which emits green fluorescence when excited by light. The binding affinity between streptavidin and biotin allows this labeled protein to be used for targeting and visualizing biotinylated molecules.

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6 protocols using alexa 488 labeled streptavidin

1

Immunohistochemical Labeling of Neuronal Markers

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For α4 nAChR: biotinylated anti-guinea pig IgG, made in donkey (bDAGp; 1/200; Vector Laboratories, CA), and Alexa-488-labeled streptavidin (1/200; Molecular Probes). For VGAT and polyclonal PV: indocarbocyanine Cy5-conjugated anti-rabbit antibody, made in donkey (DAR-Cy5, 1/200; Jackson Immunoresearch Laboratories Inc., West Grove, PA). For monoclonal PV: indocarbocyanine Cy3-conjugated anti-mouse IgG, made in donkey (DAM-Cy3, 1/200; Jackson Immunoresearch Laboratories). For SOM: Alexa-568 labeled anti-rat IgG, made in donkey (DARat-Alexa 568, 1/200; Molecular Probes).
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2

Multicolor Neuronal Cell Labeling

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After aldehyde quenching with 0.05M NH4Cl and permeabilization with 0.1% Triton X-100, cells were preincubated with 1% bovine serum albumin (BSA) for 30 min. Successive incubation was performed for 48 h at 4°C in a mixture of anti-MAP2 and anti-GFAP primary antibodies and b-LEA in PBS/BSA 0.1%. This procedure was followed by incubation with a solution of PBS/BSA 0.1% containing the secondary antibodies DAM-Cy3 (polyclonal, anti-mouse IgG, made in donkey; 1:200 dilution; Cy3 fluorochrome; Jackson Immunoresearch Laboratories) and DAR-Cy5 (polyclonal, donkey anti-rabbit IgG conjugated to the indocarbocyanine Cy5, 1:200, Jackson Immunoresearch Laboratories) to reveal monoclonal and polyclonal antibodies, and Alexa-488-labeled streptavidin (1:200, Molecular Probes) for b-LEA lectin cytochemistry. After rinsing, samples were mounted on coverslips with PBS/glycerol and inspected with a TCS-NT (Leica Laserteknik GmbH) laser scanning confocal microscope, to visualize triple fluorescent labeling. The original emission color of fluorochrome conjugated to secondary antibody DAR-Cy5 has been set to blue to facilitate visual inspection of confocal images. All the thickness of cell cultures (about 12 μm) was acquired by digital superimposing of at least 10 serial optical sections.
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3

Characterizing MGL Ligand Expression by Flow Cytometry

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For the analysis of MGL ligand expression the previously described MGL-Fc [12 (link)] was used. FITC-labeled anti-human IgG-Fc antibody (Jackson Immunoresearch, Suffolk, UK) was used to detect binding of MGL-Fc by flow cytometry. Biotinylated lectin Helix pomatia agglutinin (HPA) was obtained from Sigma–Aldrich (st. Louis, MO). Extracellular MGL ligand expression was analyzed by flow cytometry as reported before [44 (link)]. Binding of HPA (5 μg/ml) was analyzed by incubating cells for 30 min at 37°C with the lectin, followed by staining with Alexa-488 labeled streptavidin (Molecular Probes, Waltham, MA) and analyzed on a FACSCalibur (BD Biosciences, Franklin Lakes, New Jersey). Cells were selected based on forward-scatter and side-scatter patterns and exclusion of dead cells by 7-amino-actinomycin D (Molecular Probes) staining. Intracellular phosphorylated-ERK1/2 levels were analyzed by fixing with 2% paraformaldehyde and permeabilizing with 90% methanol at 4°C, followed by incubation for 1 hour at room temperature with FITC-coupled rabbit-anti-phospho-ERK1/2 (Thr202/Tyr204) (Cell Signaling), followed by analysis on a FACSCalibur.
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4

Protein-Glycan Binding Assay Protocol

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Biotinylated protein was incubated overnight with Alexa 488-labeled streptavidin (Invitrogen) at a ratio of ∼2 mol of CRD to 1 mol of streptavidin subunit. The mixture was applied to a 1-ml column of mannose-Sepharose, which was washed with loading buffer, and the complex was eluted with 0.5-ml aliquots of elution buffer. The protein was tested against version 5.1 of the glycan array of the Consortium for Functional Glycomics using the standard protocol.
Competition binding assays were performed as previously described for mincle (22 (link)). 125I-Man-BSA and 125I-IgG reporter ligands were prepared by radioiodination (23 (link)) of Man31-BSA (E-Y Laboratories) and human IgG (Sigma).
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5

Immunofluorescence Staining for LANA and HA

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Cells were incubated in 1:1 methanol-acetone at 20°C for fixation and permeabilization, followed by a blocking reagent (10% normal goat serum, 3% bovine serum albumin, and 1% glycine) for an additional 30 min. Cells were then incubated for 1 h at 25°C with 1:1000 dilution of a rat anti-LANA monoclonal antibody (ABI, for LANA wt) or a mouse anti-V5-Tag monoclonal antibody (Cell Signaling, for LANA deletion fragments) followed by 1:100 dilution of a goat anti-rat or goat anti-mouse secondary antibody conjugated to Texas Red (Invitrogen). For intracellular HA detection, cells were permeabilized for 20 min at room temperature with 0.1% Triton-X-100 in 1% BSA, and incubated overnight at 4 °C with bHABC (biotinylated hyaluronan binding complex, Sigma) (1.25μg/mL) in 1% BSA. To remove the pericellular HA, fixed cells were treated with Streptomyces hyaluronidase (1 turbidity reducing unit/mL, Seikagaku Kogyo) before permeabilization. After washing, the cells were incubated for 1 h with Alexa 488-labeled streptavidin (1:1000) (Invitrogen) for bHABC staining. Cells were counterstained with 0.5 μg/mL 4’,6-diamidino-2-phenylindole (DAPI, Sigma) in 180 mM Tris-HCl (pH 7.5) for nuclear localization. Slides were washed once in 180 mM Tris-HCl for 10 min and prepared for visualization using a Leica TCPS SP5 AOBS confocal microscope.
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6

Chemokine Receptor Expression Analysis

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mGEnC-1 were detached with 10 mM ethylenediaminetetraacetic acid (EDTA) in PBS and washed. The cells were incubated with 5 μg/ml recombinant mouse CXCL1, CXCL2 or CCL2 (Prospec-Tany) in 0.5% PVA for 1 hour at room temperature. Subsequently, cells were incubated with the biotinylated anti-chemokine antibodies described above for 30 minutes at 4°C, followed by Alexa 488-labeled streptavidin (Invitrogen Life Technologies, Breda, The Netherlands). VSV-tagged scFv antibodies were detected using a monoclonal mouse anti-VSV IgG1 antibody (clone P5D4; Sigma-Aldrich Chemie) followed by an Alexa 488-labeled goat anti-mouse IgG (H+L) antibody (Invitrogen, Life Technologies). Fluorescence was measured using a cytomics FC 500 flow cytometer and analyzed using CXP software (Beckman Coulter).
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