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5 protocols using z vad

1

Estrogen Receptor Signaling Assay

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estradiol (E2) (Sigma-Aldrich, St. Louis, MO); 4-hydroxytamoxifen (4OHT) (Sigma-Aldrich); ICI 182,780 (fulvestrant) (Tocris Bioscience, Bristol, UK); staurosporine (STS) (Tocris Bioscience); and Z-VAD (Tocris Bioscience). E2, 4OHT, and fulvestrant were solubilized in 200-proof ethanol prior to use. STS and Z-VAD were solubilized in sterile DMSO.
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2

ARPE-19 and Primary Human RPE Cell Fractionation

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ARPE-19 cells were grown and maintained in T-75 mM flasks in DMEM F-12 medium containing 10% FBS and incubated at 37 °C with a constant supply of 5% CO2. Similarly, primary human RPE cells were grown in EMEM medium containing 10% FBS and 5% fetal calf serum at 37 °C and 5% CO2. Cytoplasmic and nuclear fractions were separated by using the Cell Fractionation Kit of Cell Signaling Technology (Danvers, MA, USA) following the protocol supplied by the manufacturers. In some experiments caspases and PARP inhibitors were used. Caspase-1 inhibitor, VX-765; Caspase-3 inhibitor, Z-DEVD (Selleckchem, Houston, TX, USA); Pan caspase inhibitor, Z-VAD (Tocris Bioscience, Bristol, UK); PARP-1 and -2 inhibitor, ABT-888 and a novel PARP inhibitor, AZD2461 (Selleckchem) were added right before induction of UOS.
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Protein Purification and Inhibitor Treatments

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Clarity Western ECL Substrate was from Bio-Rad (California, USA; #170-5061), and Protein A–Sepharose was from Roche (Milan, Italy; #CL4B 17-0780-01). Digitonin, bafilomycin A1, brefeldin-A, rapamycin and trehalose were purchased from Sigma-Aldrich, Milan, Italy. LY-294002 and Z-VAD were purchased from Tocris Biosciences (UK).
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4

Apoptosis Detection Protocol

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D-Luciferin was purchased from Perkin Elmer, glosensor (Promega), Z-VAD (Tocris Bioscience), all the other chemicals and reagents required for cell culture including antibiotics, fetal bovine serum (FBS), media were obtained from Invitrogen. Annexin V-PI apoptosis detection kit (BD Biosciences), APC anti-human CD124 (IL-4Rα) and IgG isotype antibody were procured from Biolegend.
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5

Elvitegravir-Induced Erythrocyte Alterations

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Fresh Li-Heparin-anticoagulated blood samples were kindly provided by the blood bank of the University of Tübingen. The study is approved by the ethics committee of the University of Tübingen (184/2003 V). The blood was centrifuged at 120 x g for 20 min at 21 °C and the platelets and leukocytes-containing supernatant was disposed. Erythrocytes were incubated for 48 hours at 37°C in vitro at a hematocrit of 0.4% in Ringer solution containing (in mM) 125 NaCl, 5 KCl, 1 MgSO 4 , 32 N-2-hydroxyethylpiperazine-N-2-ethanesulfonic acid (HEPES; pH 7.4), 5 glucose, and 1 CaCl 2 . Where indicated, erythrocytes were exposed for 48 hours to Elvitegravir (MedChem Express, Princeton, USA). To test for an involvement of p38 kinase, erythrocytes were exposed for 48 hours to a combination of Elvitegravir and p38 kinase inhibitor SB203580 (Tocris bioscience, Bristol, UK). To test for an involvement of caspases, erythrocytes were exposed for 48 hours to a combination of Elvitegravir and pancaspase inhibitor zVAD (Tocris bioscience, Bristol, UK).
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