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4 protocols using bay11 7082

1

Cell Migration Assay for Treponema pallidum

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Cell migration assays were performed using 24-well Transwell plates (Corning Costar, Pittston, PA). First, HDVSMCs were pretreated with T. pallidum at different MOIs (T. pallidum: cell ratios of 1:1, 10:1, 100:1 and 200:1) at 37°C in an atmosphere containing 5% CO2 for 24 h in 24-well culture plates. Then, 600 μL of cell culture supernatant was collected and added to the lower chambers of Transwell plates. Approximately 2.5 ×105 THP-1 cells in a volume of 200 μL were seeded in the upper chambers of the Transwell plates. The Transwell plates were then incubated at 37°C in an atmosphere containing 5% CO2 for 2 h. THP-1 cells that migrated to the lower chamber were counted under a microscope, and the migration rate of THP-1 cells was calculated as follows: migration rate of THP-1 cells (%) = (number of THP-1 cells in the lower chamber/number of THP-1 cells added to the upper chamber) ×100. For the inhibition assays, HDVSMCs were pre-incubated with an anti-MCP-1 neutralizing antibody (30 μg/mL) (R&D Systems, Inc., Minneapolis, MN, USA) or BAY11-7082 (2 μmol/L) for 1 h. Subsequently, HDVSMCs were incubated with T. pallidum at an MOI of 100:1 for 24 h. HDVSMCs treated with phosphate-buffered saline (PBS) were used as the control cells. The migration assay was performed, and the migration of THP-1 cells was calculated as described above.
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2

TLR-Mediated Signaling Pathway Analysis

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Lipopolysaccharide (LPS, E. coli 0111: B4, TLR4 ligand), poly(I:C) (TLR3 ligand), and CpG ODN (TLR9 ligand) were purchased from Sigma-Aldrich. ChIP Grade Protein G Magnetic Beads, Cell Lysis Buffer, Anti-Myd88, Anti-Traf6, Anti-p65, Anti-p-p65 (Ser536), Anti-Ikkα/β, Anti-p-Ikkα/β (S176/180), Anti-IκBα, Anti-p-IκBα (S32), Anti-ERK, Anti-p-ERK (Thr202-Tyr204), Anti-JNK, Anti-p-JNK (Thr183-Tyr185), Anti-p38, Anti-p-p38 (Thr180-Tyr182) and Anti-Syk and Anti-p-Syk (Tyr-525/526) were from Cell Signaling Technology. Anti-DAP12 was purchased from Abcam. Anti-β-actin, Anti-rabbit IgG-HRP, and anti-mouse IgG-HRP were from Santa Cruz Biotechnology. Anti-LaminA/C, Anti-Flag and Anti-Myc and Anti-V5 were purchased from Proteintech. Anti-Ocilrp2 (AF3370) was from purchased R&D. The NF-κB inhibitor BAY11-7082 (10 μM), Tbk inhibitor Amlexanox (10 μM), Mek inhibitor PD98059 (10 μM), PI3K inhibitor Wortmannin (5 μM), Erk inhibitor SHC772984 (10 μM), Jnk inhibitor SP600125 (10 μM), or p38 inhibitor SB203580 (10 μM), Syk inhibitor R406 (5 μM) were from Selleckchem.
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3

Investigating PMA-Induced Signaling Pathways

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2.5 × 105 cells were plated in a 6-well plate 1 day prior to drug treatment. PMA was then added to the media and incubated at 37°C with 5% CO2 for 6 hours unless otherwise indicated. For experiments utilizing inhibitors, cells were pretreated with inhibitors 30 minutes prior to PMA induction (25ng/mL). PMA (Fisher Scientific), cyclohexamide (Acros Organics), Gö6983 (Cayman Chemical), LY294002 (EMD Chemicals), UO126 (EMD Chemicals), BIM-1 (Cayman Chemical), Gö6976 (Enzo Life Sciences), AEB071 (Medchem Express), BAY 11-7082 (R&D Systems), MG132 (Fisher Scientific), and TPCA-1 (Cayman Chemical) were stored as recommended.
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4

Fibroblast Preconditioning and Cytokine Stimulation

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Control and patient fibroblasts were pre-conditioned with BAY 11–7082 or JQ1 for 24 hours prior to TNFα or TGFβ stimulation (10 ng/mL, 12 hours, R&D Systems) in complete media.
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