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5 protocols using blasticidin s

1

Assessing DNA Damage Response Pathways

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The following chemicals were purchased from Sigma-Aldrich: ATM inhibitor KU-60019 (SML1416-5MG), ATR inhibitor AZ-20 (SML1328-5MG), bleomycin (B8416), etoposide (E1383), doxycycline (D3072), cisplatin (P4394), 5-Bromo-2′-deoxyuridine (B5002). Puromycin was purchased from Thermo-Fisher (A1113802), blasticidin S was purchased from Carl Roth (CP14.2).
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2

Transient and Stable Transfection of HeLa Cells

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HEK293 and HeLa cells were transfected with Lipofectamine 3000 (Life Technologies, L3000) according to the manufacturer’s instructions. mCherry tag containing vectors, CDK9-cGFP, CCNT1-cGFP and ZNF451-GFP vectors were transiently transfected in HeLa cells. NELFA-cGFP, NELFA-BG-nGFP, GFP-3FHBH (kind gift from Timmers lab, Freiburg and Akhtar Department, MPI Freiburg) were stably transfected in Flp-In T-Rex HeLa cells grown in 100 μg/mL Zeocin (Invitrogen, R25001) for at least three days before transfection. Stable positive clones were selected for at least three weeks in 15 μg/mL blasticidin S (Carl Roth CP14.1) and 100 μg/mL hygromycin B (Thermo Fisher Scientific, 10687010). Expression of proteins was induced with 1 μg/mL tetracycline (Sigma-Aldrich, T7660).
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3

Lentiviral-Mediated GFP Expression

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The introduction of GFP in patient-derived cell models was performed using lentiviral particles (Amsbio, Abingdon, UK, LVP436) following the manufacturer’s recommendations. Resistance to Blasticidin S (CarlRoth, Karlsruhe, Germany, #CP14.2) was used for selection, and GFP expression was monitored by immunofluorescence microscopy and flow cytometry.
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4

Assay Reagents for DNA Damage Response

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The following chemicals were purchased from Sigma-Aldrich: ATM inhibitor KU-60019 (SML1416-5MG), ATR inhibitor AZ-20 (SML1328-5MG), bleomycin (B8416), etoposide (E1383), doxycycline (D3072), cisplatin (P4394), 5-Bromo-2′-deoxyuridine (B5002. Puromycin was purchased from Thermo-Fisher (A1113802), blasticidin S was purchased from Carl Roth (CP14.2).
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5

Cellular Stress Response Assays

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The following chemicals were purchased from Sigma-Aldrich: ATM inhibitor KU-60019 (SML1416-5MG), ATR inhibitor AZ-20 (SML1328-5MG), bleomycin (B8416), etoposide (E1383), doxycycline (D3072), cisplatin (P4394), 5-Bromo-2′-deoxyuridine (B5002). Puromycin was purchased from Thermo-Fisher (A1113802), blasticidin S was purchased from Carl Roth (CP14.2).
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