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11 protocols using gel dol ez imager

1

Protein Expression Analysis by SDS-PAGE

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The cell protein was extracted to determine its concentration according to instructions of BCA protein assay kit (Pierce, Thermo Fisher Scientific, USA), followed by adding loading buffer for 10 min boiling at 95 °C. After loaded into 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), the total protein of 60 μg was transferred to polyvinylidene fluoride (PVDF) membrane and sealed with 5% bovine serum albumin (BSA) at room temperature for 1 h. Next, PVDF membrane was incubated with anti-SAA1 (ab171030, 1 μg/ml), anti-NADPH oxidase 4 (ab133303, 1/2000), anti-phospho-p38 (ab4822, 1/1000), anti-p38 (ab197348, 1/500), anti-phospho-NF-kB p65 (ab86299, 0.04 μg/ml), anti-NF-kB p65 (ab16502, 1 μg/ml) and β-actin (ab227387, 1/20000) (all purchased from Abcam, Cambridge, MA, USA) at 4 °C overnight. With tris buffered saline with Tween (TBST) washing 3 times/5 min, PVDF membrane was incubated with goat anti-rabbit IgG H&L (HRP) (ab6721, 1/5000, Abcam, Cambridge, MA, USA) for 1 h and washed 3 times/5 min. Taking β-actin as loading control, PVDF membrane was developed by chemiluminescent reagent using Bio-rad Gel Dol EZ imager (GEL DOC EZ IMAGER, Bio-rad, California, USA). The gray value of target band was analyzed using Image J software. The experiment was repeatedly carried out in triple.
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2

Western Blot Analysis of Autophagy and Apoptosis Markers

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The proteins were extracted, and the concentrations were measured with a bicinchoninic acid kit (Boster Biological Technology Co., Ltd., Wuhan, Hubei, China). Then the proteins were loaded into each well of the gel (30 μg each) and separated using 10% polyacrylamide gel electrophoresis (Boster). After that, proteins were transferred to polyvinylidene fluoride membranes, and incubated with primary antibodies against RAC1 (1: 1000, ab129758), light chain 3 I (LC3I), LC3II (ZSGB-Bio Co., Ltd, Beijing, China), p62 (2 μg/mL, ab56416), Beclin-1 (1: 2000, ab207612), Bcl2 (ab32124), Bax (1: 1000, ab53154), cleaved caspase-3 (1 μg/mL, ab2302), and β-actin (1: 5000, ab8227) overnight at 4°C. These aforementioned antibodies were purchased from Abcam Inc., (Cambridge, MA, USA), except for the antibodies against LC3I and LC3II. Afterwards, the membranes were rinsed with tris-saline buffer plus Tween (TBST) 3 times (5 minutes each) and incubated with the secondary antibody (ZSGB-Bio). After 3 washes, the membranes were developed, and bands were visualized using the Gel Dol EZ Imager (Bio-Rad Laboratories, Hercules, CA, USA) and analyzed by calculating the gray value using ImageJ software (National Institutes of Health, Bethesda, Maryland, USA).
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3

Western Blot Analysis of Protein Expression

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After the extraction of proteins in the cell, protein concentration was detected according to BCA kit. The extracted proteins were added to the buffer, which was heated to 95°C for 10 min. Each well was loaded with 30 μg proteins which were separated by 10% SDS-PAGE at 80–120 V. The voltage of wet transfer and transmembrane was controlled at 100 mV, lasting 45–70 min. After proteins were transferred to PVDF membrane, the membrane was sealed in 5% skim milk powder for 1 h and incubated with primary antibodies [anti-PIF1 (ab192369; Abcam), anti-TERT (ab191523; Abcam), anti-Bax (ab32503; Abcam), anti-Bcl-2 (ab32124; Abcam), anti-caspase-3 (ab2302; Abcam)] at 4°C overnight. After washing with buffer, the membrane was then incubated with rabbit horseradish peroxidase-linked IgG at room temperature for 1 h. After the washing by buffer for three times, the membrane was treated with chemiluminescent reagent to develop protein bands. With GAPDH as internal reference, Bio-rad Gel DolEZ imager was used for protein imaging, and Image J software was used to analyze the gray level of the target band.
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4

Western Blot Analysis of Signaling Proteins

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Cells were seeded in a 12-well plate, lysed using RIPA lysis buffer on ice and resolved on 4% stacking gel and 10% running gel. Thereafter, the protein on the gel was transferred to a polyvinylidene fluoride (PVDF) membrane and blocked for 2 h. The blots were probed with the following primary antibodies (rabbit antihuman antibodies) overnight: ZIC1 (ab134951, 1: 1000-1: 10,000), Akt (ab8805, 1: 500), mTOR (ab2732, 1: 1200), P-Akt (ab38449, 1: 500-1: 1000), P-mTOR (ab109268, 1: 1000-1: 10,000), CypA (ab41684, 1 µg/mL), CXCR4 (ab124824, 1: 100), E-cadherin (ab40772, 1: 10,000-1: 50,000), caspase-3 (ab13847, 1: 500), bcl-2 (ab59348, 1: 500-1: 1000) and GAPDH (ab9485, 1: 2500). Next, the secondary antibody labeled with HRP (ab191866) was added and incubated at room temperature for 2 h. All antibodies were procured from Abcam (Cambridge, UK). The blots were developed using chemiluminescence (Invitrogen, Carlsbad, CA, USA) with a Bio-rad Gel Dol EZ imager (Bio-rad, Hercules, CA, USA). Each experiment was repeated three times.
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5

Western Blot Analysis of EV Protein Markers

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After the EVs were lysed with RIPA lysate and centrifuged to harvest the supernatant and the protein concentration was determined using a BCA kit (Beyotime). The extracted protein was added to the sample buffer and soaked in 95℃ water bath for 5 min. After preparing 10% SDS-PAGE, the protein was transferred to PVDF membranes, which were blocked for 2 h and then incubated with primary antibodies CD9 (1:2000, ab223052, Abcam, Cambridge, MA, USA), CD63 (1:1000, ab134045, Abcam) and calnexin (1:2000, ab10286, Abcam) at 4℃ overnight. After 3 regimens of TBST washing, the membranes were added with secondary antibody (1:2000, ab205718, Abcam) for 1 h and developed using chemiluminescence reagent and Gel Dol EZ imager (Bio-rad, Hercules, CA, USA). Image J software (NIH, Bethesda, MD, USA) was adopted to analyze the gray value of target bands.
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6

Western Blot Analysis of Bone Remodeling Markers

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Total proteins from cells and tissues were extracted, and the concentrations were determined using a bicinchoninic acid kit (Qiagen GmbH, Hilden, Germany) according to the manufacturer’s protocol. The extracted proteins were run on sodium dodecyl sulfate polyacrylamide gel electrophoresis with the voltage increasing from 80 V to 120 V. Then the proteins were transferred onto polyvinylidene fluoride membranes using the semi-dry method at 80 mV for 30–45 min. The membranes were incubated with 5% bovine serum albumin at room temperature for 1 h, and then incubated with the primary antibodies against OPG (1:1000, ab2302), receptor activator of nuclear factor kappa B (RANK, 1:1000, ab32370), RANK ligand (RANKL, 1:5000, ab32064) and β-actin (1:5000, ab227387) (all purchased from Abcam) at 4 °C overnight. Afterwards, the membranes were washed with tris-buffered saline tween (TBST) (3 × 5 min), and incubated with the corresponding secondary antibody horseradish peroxidase-labeled immunoglobulin G (ab6747, 1:10000, Abcam) at room temperature for 1 h, After 3 times of TBST washes (5 min for each), the bands were visualized using chemiluminescence reagent on a Bio-Rad Gel Dol EZ imager (Bio-Rad Laboratories, California, USA). The target band was analyzed by calculating the gray value using ImageJ software (National Institutes of Health, Bethesda, Maryland, USA).
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7

Quantitative Analysis of BMP-2 Protein Expression

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The cells from the three groups were digested with cell lysis buffer (0.1
mol/l NaCl, 0.01 mol/l Tris/HCl (pH 7.6), 0.001 mol/l
EDTA (pH 8.0), 1 μg/l aprotinin and 100 μg/l
phenylmethylsulphonyl fluoride) for 30 min and then centrifuged at 1200 rpm for 5 min
to collect the supernatant. The amount of proteins were determined by the Coomassie
Brilliant Blue method and an equal volume of sampling buffer was added. The resultant
was boiled for 5 min and then sampled at 100 μg per strip. Subsequently,
SDS/PAGE and Western blotting assay were performed. The Bio–Rad Gel Dol
EZ imager (Bio–Rad Laboratories, Hercules, CA, U.S.A.) was used for developing
and the ImageJ software was used to detect the grey value of the BMP-2 band.
β-actin served as the internal reference. The concentration of spacer gel was
4.5% and the concentration of separation gel was 10%. The protein
separated by electrophoresis was transformed into the PVDF membrane and 1:600 rhBMP-2
rabbit anti-human monoclonal antibody (Wuhan Boster Biological Technology Ltd.,
Wuhan, Hubei, China) was added into the blocked PVDF membrane. This was then stored
overnight at 4°C. Subsequently, the protein was incubated with 1:1000 goat
anti rabbit IgG (Wuhan Boster Biological Technology Ltd., Wuhan, Hubei, China),
labelled with horseradish peroxidase for 3 h, washed and developed in DAB
solution.
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8

Western Blot Analysis of Protein Expression

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The concentration of the extracted protein was measured with the bicinchoninic acid (BCA) reagent kit (Beyotime Biotechnology Co., Shanghai, China). Equal amounts (30 μg) of total protein was mixed with SDS loading buffer and boiled for 10 min at 100°C and resolved on 10% SDS-PAGE for 30 min at 80V and then at 120V for 1h. Then, the proteins were wet transferred onto a PVDF membrane for 90 min at 100V. The membrane was blocked in 5% BSA (Beyotime Biotechnology Co., Shanghai, China) at room temperature for 1h, and then probed with primary antibodies against GSTM1 (ab113432, 1: 1000), 78 kDa glucose-regulated protein (GRP78) (ab173613, 1: 100), p-PERK (CST, #3179, 1: 1000), p-IRE1α (NB100-2323, 1: 1000) and C/EBP homology protein (CHOP) (ab10444, 1: 250), GAPDH (CST, #2118, 1: 1000) and superoxide dismutase (SOD) (ab13533, 1: 5000) overnight at 4°C. The membranes were then washed by TBST thrice for 5 mins and incubated with the corresponding secondary antibodies for 1h. The blots were then washed in TBST thrice for 5 min and developed with ECL chemiluminescence reagent (Nanjing Vazyme Biotech Co. Ltd, Nanjing, China) and imaged by the Bio-Rad Gel Dol EZ imager (GEL DOC EZ IMAGER, Bio-Rad, CA, USA). GAPDH was used as internal reference and the relative levels of different proteins were quantified.
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9

Protein Expression Analysis of BMP-2 Signaling

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Proteins from cells in each group were extracted to identify the protein concentration using a BCA kit (Boster, Wuhan). Loading buffer was then added to the proteins, which were boiled at 95 °C for 10 min. Then, 30 μg of loading buffer was added to each well, and the proteins were separated by a 10% polyacrylamide gel (Boster, Wuhan). The voltage for electrophoresis was increased from 80 V to 120 V, and the proteins were transferred to a membrane at 100 mV for 45–70 min. The membrane was transferred to PVDF, followed by blocking with 5% BSA at ambient temperature for 1 h. β-actin was considered as a control. Primary antibodies for BMP-2, Smad1, p-Smad1, Runx2, osteocalcin (OC), and osteopontin (OPN) (1: 1000, Abcam, America) and primary antibody for β-actin (1:3000, Abcam, America) were added and incubated overnight at 4 °C. The membrane was washed three times with TBST for 5 min each. Incubation with secondary goat anti-rat antibodies (Jackson, America) at ambient temperature was conducted. Then, the membrane was washed three times for 5 min each. The color of the membrane was developed using chemiluminescence reagents. A Bio-Rad Gel Dol EZ imager (GEL DOC EZ IMAGER, Bio-Rad, California, USA) was used for the color observation. ImageJ software was used to analyze the grayscale value of the target band. Experiments were conducted three times to obtain the average value.
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10

Western Blot Analysis of JAK2/STAT3 Signaling

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Total protein was analyzed for the protein concentration using a bicinchoninic acid (BCA) kit. The protein samples were added to loading buffer, boiled for 5 min, and loaded onto gels at 60 μg/well. Next, the proteins were isolated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), transferred onto polyvinylidene fluoride (PVDF) membranes and blocked with 5% BSA at room temperature for 1 h. Next, the PVDF membranes were incubated overnight at 4°C with the following primary antibodies: anti-phospho JAK2 (ab32101, 1/5000), anti-JAK2 (ab108596, 1/5000), anti-phospho STAT3 (ab76315, 1/20000), anti-STAT3 (ab68153, 1/2000), and anti-Hsp70 (ab79852, 1/25000); all antibodies were purchased from Abcam (Chicago, IL, USA). The next day, the membranes were washed with TBS plus 0.05% (vol/vol) Tween 20 (TBST) 3 times/5 min, followed by the addition of the corresponding secondary antibody for a 1-h incubation. Later, the membranes were washed again with TBST 3 times/5 min before the chemiluminescence (CL) reaction. β-actin was used as the loading control; a Bio-Rad Gel Dol EZ Imager (Bio-Rad, California, USA) was used for development, and Image J was used for the analysis of the gray value of the target bands. Independent experiments were repeated in triple duplicates.
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