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80 protocols using ecl western blotting substrate

1

Protein Extraction and Western Blot Analysis

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Total protein was extracted from cells and patients' tissues using RIPA buffer (Beyotime, Shanghai, China) containing a protease inhibitor cocktail (Roche Diagnostics, Basel, Switzerland) and quantified using the Pierce™ BCA Protein Assay Kit (Invitrogen; Thermo Scientific). The same amount of protein (50 μg) was then separated on 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to a nitrocellulose filter (NC membrane; Millipore, Billerica, MA, USA). Membranes were then blocked in 5% skim milk for 1 h at room temperature and blocked with primary antibodies against PEDF(ab10389), caspase 3(ab197202), caspase 9(ab219590) (Abcam, Cambridge, Mass., USA), overnight at 4°C followed by incubation with horseradish peroxidase (HRP) conjugated goat anti-rabbit secondary antibody (ab6721, 1: 1,000, Abcam) for 1 h at room temperature. Finally, specific protein signals were visualized using ECL Western blotting substrates (Promega, Madison, WI, USA) and quantified by Image J software (National Institutes of Health, Bethesda, Maryland, USA).
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2

Protein Extraction and Western Blot Analysis

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Cells were harvested and lysed using RIPA buffer (Thermo Fisher Scientific) in the presence of the protease inhibitor cocktail (Sigma‐Aldrich) at 24 hours after LED irradiation. Proteins were then quantified with a BCA kit (PA115; Tiangen Biotech, Beijing, China), resolved on 10% sodium dodecyl sulfate‐polyacrylamide gel electrophoresis (SDS‐PAGE) gels, and transferred onto polyvinylidene difluoride (PVDF) membranes (162‐0177; Bio‐Rad, Hercules, CA, USA). Membranes were incubated with the appropriate primary antibody followed by incubation with the corresponding horseradish peroxidase (HRP)‐conjugated secondary antibody, and proteins were detected with enhanced chemiluminescence (ECL) Western blotting substrates (W1001; Promega, Madison, WI, USA).
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3

Western Blot Protein Detection

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Protein samples were separated on 10–15% polyacrylamide gels and transferred to Amersham nitrocellulose membranes (GE healthcare, Hatfield, UK) by Trans-blot Turbo Transfer system (Bio-Rad, Watford, UK). Membranes were blocked using TBS + 0.1% Tween 20 with 5% (w/v) skimmed milk powder, and probed with desired primary antibodies and secondary horseradish-peroxidase-conjugated IgG antibodies at 1:5000 (Dako Agilent, Santa Clara, CA, USA). Protein bands were detected using a G:BOX (Syngene) after treating membranes with ECL Western blotting substrates (Promega). Densitometry was performed using ImageJ 1.51 software.
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4

Glioma Cell Line Protein Extraction and Detection

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Briefly, total protein of glioma cell lines was extracted using the ExKine Total Protein Extraction Kit (Abbkine) in accordance with its protocol. Equal amounts of protein (30 μg/lane) were separated by 10% SDS‐PAGE and subsequently transferred to PVDF membranes (EMD Millipore). After blocking for nonspecific binding, the membranes were incubated with antibodies for RPN2 (1:200 dilution; ab244399; Abcam), TCF4 (1:10,000 dilution; ab76151; Abcam), c‐myc (1:1000; ab39688; Abcam), cyclin D1 (1:10,000; ab134175; Abcam) or β‐actin (1:5000; ab6276; Abcam) overnight at 4°C and followed by incubation with secondary antibodies for 1 h at room temperature. Eventually, an ECL western blotting substrate (Promega) was used to develop the protein bands.
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5

Quantifying Synaptic Protein Levels

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The primary antibodies used were anti-GAPDH (1:2000 abcam ab8245), anti-NR2A(1:1000 abcam ab124913), anti-NR2B(1:2000 abcam ab81271), anti-NR1(1:2000 abcam ab109182), anti-VGLUT1(1:2000 abcam ab180188). The secondary antibodies used were anti-mouse IgG HRP(1:5000 promega W4208) and anti-rabbit IgG HRP(1:5000 promega W4011). The brands were detected with ECL Western Blotting Substrate (promega w1001).
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6

Western Blot Analysis of CDK6 Expression

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SiHa cells were harvested at 24 h post-transfection and cells were counted. Cell pellets containing 105 SiHa cells were resuspended in 1 mL RIPA solution (Cell Signaling Technology) to extract total proteins. Concentrations of total proteins were measured using BCA assay (Cell Signaling Technology). In a 95°C incubator, protein samples were denatured for 10 min, followed by electrophoresis using 12% SDS-PAGE gel. After that, proteins were transfected to PVDF membranes and blocking was performed in 5% non-fat milk (PBS) at room temperature for 1 h. GAPDH (1:1800, ab37168, Abcam) and CDK6 (1:1800, ab151247, Abcam) rabbit polyclonal primary antibodies were used to incubate with the membranes at 4°C for 18 h, followed by incubation with HRP (IgG) (1:1800; ab6721; Abcam) goat anti-rabbit secondary antibody at 24°C for 2 h. ECL Western Blotting Substrate (Promega Corporation) was dropped onto the membranes and MYECL™ Imager (Bio-Rad) was used to detect signals. Image J v1.46 software was used for data normalizations.
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7

Western Blot Analysis of Protein Expression

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Equal amount of proteins (50 μg) were separated onto SDS‐polyacrylamide gels and were electrotransferred to PVDF membranes (Millipore, Bedford, MA, USA). The membranes were immunoblotted overnight at 4°C with primary antibodies, followed by their respective secondary Abs; GAPDH was used as the loading control. Primary Abs used included anti‐FOXC1 (1:500, AP8907B; Abgent, San Diego, CA, USA), anti‐CXCR4 (1:1000, ab58176; Abcam, Cambridge, UK), anti‐PCMT1 (1:1000, ab97446, Abcam), anti‐GAPDH (1:2000, sc‐47724; Santa Cruz Biotechnology, Dallas, TX, USA). After that, the membranes were incubated with corresponding HRP‐conjugated secondary Abs. The blot signals were visualized using the ECL western blotting substrate (Promega).
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8

Western Blot Analysis of PD-L1 Expression

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Cells were lysed in RIPA buffer (0.1% SDS, 0.5% sodium deoxycholate, 250 Mm NaCl, 1% Triton X-100 and 50 Mm pH 8.0 Tris) containing a phosphatase inhibitor and protease inhibitor cocktail tablets (Roche) and quantified using Pierce™ BCA Protein Assay kit (Thermo Fisher Scientific, 23227) according to the manufacturer’s instructions. One hundred micrograms of total protein from cells were separated by 10% SDS-PAGE and transferred to nitrocellulose membrane (Pall Corporation), then the membranes were blocked with 5% nonfat milk in 1× TBST (Tris-buffered saline with Tween 20). Proteins were probed with the following primary antibodies: monoclonal anti-PD-L1 (Cell Signaling Technology, E1L3N, 1:3000) and anti-β-actin antibodies (Santa Cruz, sc-47778, 1:1000), and washed three times with 1× TBST. Goat anti-rabbit IgG HRP (Abcam, ab6721) and goat anti-mouse IgG HRP antibodies (Abcam, ab6789) were used as secondary antibodies. Proteins were detected using ECL western blotting substrate (Promega, W1015).
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9

Quantifying Apoptosis Markers in Brain Tissue

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Western blotting of brain tissue was performed with 30 μg of protein transferred onto PVDF transfer membrane from a 10% SDS-PAGE. The blots were probed with rabbit anti- cleaved caspase-3 (1:1000, Abacm, ab52293) and rabbit polyclonal anti-Fas (1:1000, Abcam, ab82419). Secondary polyclonal antibodies were also probed to rabbit IgG coupled to HRP (1:2000, Abcam, ab97051). The blots were developed using ECL Western blotting substrate (Promega, Medison, WI, USA).
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10

Western Blot Analysis of HEXA and HEXB

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Six days after transduction native rMSCs, rMSCs-Katushka, rMSCs-HEXA-HEXB, native hMSCs, hMSCs-Katushka, hMSCs-HEXA-HEXB were trypsinized and washed three times with saline. Next, a western blot analysis was conducted, by the protocol described in our previous research (Shaimardanova et al., 2022). In brief, RIPA buffer containing proteinase and phosphatase inhibitors was used for protein extraction. Protein concentration in the sample was determined using the PierceTM BCA Protein Assay Kit (Thermo Fisher Scientific, Waltham, MA, USA, Cat# 23225). Primary rabbit polyclonal antibodies to HEXA (dilution 1:300, Cloud-Clone Corp., Houston, TX, USA, Cat# PAA195Hu01, RRID: AB_2936290) and HEXB (dilution 1:250, Cloud-Clone Corp., Cat# PAA637Hu01, RRID: AB_2936291) and secondary goat polyclonal antibodies to rabbit immunoglobulin G conjugated with horseradish peroxidase (dilution 1:1000, Sigma-Aldrich, Cat# A6154, RRID: AB_258284) were used for the analysis. The membranes were incubated with primary antibodies for 12 hours at 4°C, with secondary antibodies for 2 hours at room temperature. For detection and visualization, ECL Western Blotting Substrate (Promega, Madison, WI, USA, Cat# W1001) and ChemiDocXRS+ instrument (BioRad, Hercules, CA, USA) were used. The experiment was carried out in three biological and three technical replicates 24 hours after transduction.
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