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Na9310

Manufactured by GE Healthcare
Sourced in United States, Japan, United Kingdom

The NA9310 is a laboratory equipment product manufactured by GE Healthcare. It is designed to perform specific functions within a laboratory setting. Due to the technical nature of this product and the need to provide an unbiased and factual description, further details about its core function cannot be provided without the risk of extrapolation or interpretation. As a result, a more detailed description cannot be presented while maintaining the requested approach.

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8 protocols using na9310

1

Western Blot and Co-Immunoprecipitation Assay

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We used the following primary antibodies: first antibodies: anti-Flag (1:1000 in 5% BSA/TBST, M2, F7425, Sigma-Aldrich), anti-HA (1:2000 in 3% skim milk/TBST, clone HA-7, H9658 Sigma-Aldrich), myc (1:400 in 5% BSA/TBST, clone 9E10, sc-40, Santa Cruz Biotechnology) and GAPDH (1:1000 in 5% BSA/TBST, 14C10, rabbit mAb; Cell Signaling Technology); second antibodies: ECL anti-mouse IgG, peroxidase-linked species-specific F(ab’)2 fragment (from sheep) (1:10,000 in 3% skim milk/TBST, NA9310; GE Healthcare), ECL anti-rabbit IgG, peroxidase-linked species-specific F(ab’)2 fragment (from donkey) (1:10,000 in 3% skim milk/TBST, NA9340; GE Healthcare), and mouse TrueBlot ULTRA: anti-mouse Ig HRP (1:1000 in 3% skim milk/TBST; eBioscience). IPs used the anti-HA high-affinity (3F10; Roche) normal mouse IgG (GE Healthcare).
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2

Western Blot Analysis of Proteins

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Total protein lysates were extracted from whole-cell lines in phosphate-buffered saline. The Pierce BCA Protein Assay Kit (Cat#23225, Thermo Fisher) was used to determine concentration. All proteins were separated by sodium dodecyl sulfate–polyacrylamide gel electrophoresis, and the proteins in the gel were then transferred to polyvinylidene difluoride blotting membrane (A29532146, P 0.45 GE Healthcare Life Science, Chicago, IL, USA). Trans-Blot Turbo Cassette (Bio-Rad, Hercules, CA, USA) was used for blotting. For blocking, 5% skimmed milk was used. Primary antibodies including anti-YTHDF1 (1:1000 dilution, 17479-1-AP, Proteintech), YTHDF2 (1:1000 dilution, ab170118, Abcam), PD-L1 (1:1000 dilution, A1935; ABclonal, Tokyo, Japan), and GAPDH (1:1000 dilution, Ab8245; Abcam) were incubated overnight at 4°C. Secondary antibodies for rabbit (1:20,000 dilution, NA9340; GE Healthcare Life Science) or mouse (1:20,000 dilution, NA9310; GE Healthcare Life Science) were incubated at room temperature for 1 hour. To visualize the band, we used enhanced chemiluminescence (Pierce ECL Plus Substrate, Thermo Scientific). The photo was detected by a chemi-doc (Bio-Rad). Signal intensity was quantified using Image Labo Software (Bio-Rad).
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3

Western Blot Analysis of Tumor Proteins

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Western blot analyses were carried out as described previously (Zhu et al. 2014 (link)). Tumor tissues or cultured cells were washed with phosphate-buffered saline and homogenized in a solution with 50 mM Tris buffer, 150 mM NaCl, 1 mm ethylenediaminetetraacetic acid, 1% NP40 and proteinase (Roche Diagnostics, GmbH, Mannheim, Germany)/phosphatase inhibitors (Halt Phosphatase inhibitor cocktail, Thermo Scientific). After centrifuge at 14000 rpm for 5 minutes, lysates were used for Western blot analysis. The antibodies against MYC were used (ab32072) from Abcam, phosphorylated RB (S780) (#9307), RB (#9309), Bim (#2933), p-Erk½ (#9101), total-ERK (#9102), p27 (#3686), PARP (#9542) and GAPDH (#2118) from Cell Signaling. After being washed, the membranes were incubated with horseradish peroxidase-conjugated anti-mouse immunoglobulin G (Gillings, et al.) (NA9310 GE Healthcare) or anti-rabbit IgG (NA9340 GE Healthcare) as the secondary antibody and subsequently detected by means of an ECL system (Western Lightning® Plus-ECL, PerkinElmer, Waltham, MA). Band intensities were quantified by the ImageJ software (ImageJ 1.48v; Wayne Rasband, NIH).
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4

Cell Lysis and Immunoblotting Protocol

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For cell lysis a cell extraction buffer was used with following ingredients: 50 mM Tris pH 7.4 (Merck), 150 mM NaCl (Merck), 2 mM ethylene glycol tetraacetic acid (EGTA; Sigma), 2 mM ethylene diamine tetraacetic acid (EDTA; Sigma), 25 mM NaF (Sigma-Aldrich), 0.1 mM Na3VO4 (Sigma), 0.1 mM phenylmethanesulfonylfluoride (PMSF; Sigma), 2 mg/ml leupeptin (Serva Feinbiochemika), 2 mg/ml aprotinin (Serva Feinbiochemika), 0.2% Triton X-100, and 0.3% Nonidet P-40 (Sigma). Cells were incubated for 30 min on ice. Separation of protein extracts was achived by SDS-PAGE and proteins were transferred via immunoblotting. Primary antibodies were rabbit anti-ETS2 (1:1000, GTX104527, GeneTex), rabbit anti-MYC (1:1000, sc-40; Santa Cruz) and mouse anti-β-actin (1:3000, A5541; Sigma-Aldrich). For detection anti-mouse IgG horseradish peroxidase-labeled secondary antibody (1:10000, NA9310; GE Healthcare) and ECL (Thermo Scientific/Pierce 32106) were used.
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5

Western Blot Protocol for Protein Analysis

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Western blot analyses were carried out as described previously [5 (link)]. Tumor tissues or cultured cells were washed with phosphate-buffered saline and homogenized in a solution with 50 mM Tris buffer, 150 mM NaCl, 1 mm ethylenediaminetetraacetic acid, 1% NP40 and proteinase (Roche Diagnostics, GmbH, Mannheim, Germany)/phosphatase inhibitors (Halt Phosphatase inhibitor cocktail, Thermo Scientific). After centrifuge at 14000 rpm for 5 minutes, lysates were used for Western blot analysis. The antibodies against MYC were used (ab32072) from Abcam, p21 (sc-6246), E2F-3 (sc-878) from Santa Cruz Biotechnology, INC (Santa Cruz, CA, USA), phosphorylated RB (S780) (#9307), RB (#9309), Bim (#2933), p-Erk1/2 (#9101) and total-ERK (#9102) from Cell Signaling, alpha tubulin (T6199) from Sigma Aldrich. After being washed, the membranes were incubated with horseradish peroxidase-conjugated anti-mouse immunoglobulin G [21 (link)] (NA9310 GE Healthcare) or anti-rabbit IgG (NA9340 GE Healthcare) as the secondary antibody and subsequently detected by means of an ECL system (Western Lightning® Plus-ECL, PerkinElmer, Waltham, MA, USA). Band intensities were quantified by the ImageJ software (ImageJ 1.48v; Wayne Rasband, NIH).
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6

Quantitative Analysis of CRM1 Expression

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Tissues were lysed in lysis buffer (20 mM Tris-HCl, 150 mM NaCl, 2 mM EDTA, 1% Triton X-100, and 1X cocktail protease inhibitors). Total protein from the cell lysate was quantified using the bicinchoninic method (Beyotime Institute of Biotechnology, Haimen, China). A total of 10 µl total protein lysates in each lane were separated using 12% SDS-PAGE and transferred onto nitrocellulose membranes (Whatman; GE Healthcare Life Sciences, Little Chalfont, UK). Western blot analysis was performed using primary antibodies incubation overnight at 4°C: CRM1 (1:500; ab77977; Abcam) and GAPDH (1:1,000; sc-32233; Santa Cruz Biotechnology, Inc., Dallas, TX, USA). Primary antibodies was probed with HRP-conjugated secondary antibodies incubated for a further 10 min at 1:1,000 dilution (NA9310; GE Healthcare Life Sciences). Enhanced chemiluminescence reagents (Santa Cruz Biotechnology, Inc.) were used for detecting the binding antibodies. The ratio of pixel density value of CRM1 was represented by the CRM1/GAPDH grey level ratio under chemiluminescence equipment. The grey level was analyzed using the Quantity One software (Bio-Rad Laboratories, Inc., Hercules, CA, USA).
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7

Quantification of PcG Protein Levels by Western Blot

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Western blotting was performed as described previously (Nakayama et al., 2012 (link)) on samples containing 60 wing or leg discs. Antibodies were used at the following dilutions: anti-E(z) (1:4000), anti-Pc (1:4000), anti-Pho (1:4000), anti-Pcm (gift of S. F. Newbury; 1:2000), anti-Spt16 (Dre4) (Nakayama et al., 2012; 1:4000 (link)), anti-Mbf1 (1:5000), anti-FLAG M2 (Sigma, F3165; 1:2000), anti-tubulin (Developmental Studies Hybridoma Bank, a gift of K. Saito, National Institute of Genetics, Japan; 1:5000), anti-rabbit and anti-mouse IgG-HRP (GE Healthcare, NA9340 and NA9310; 1:5000) and anti-mouse IgG-HRP.
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8

Antibodies and siRNA for Akt2 signaling

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A rat monoclonal antibody against the hemagglutinin (HA) epitope tag (11 867 423 001), a mouse monoclonal antibody against the Myc epitope tag (05–724), and rabbit polyclonal antibody against the V5 epitope tag (V8137) were purchased from Roche Applied Science (Germany), Merck Millipore (MA, USA), and SIGMA-Aldrich (MO, USA), respectively. A goat polyclonal antibody against Akt2 (AF23151) was purchased from R&D systems (MN, USA). Mouse monoclonal antibodies against Rac1 (610650) and RalA (610221) were purchased from BD Biosciences (CA, USA). A mouse monoclonal antibody against α-tubulin (T9026) was purchased from SIGMA-Aldrich. Antibodies against goat IgG, mouse IgG, rabbit IgG, and rat IgG conjugated with CF 350/543/647 were purchased from Biotium (CA, USA). A sheep polyclonal antibody against mouse IgG conjugated with horseradish peroxidase (NA9310) was purchased from GE Healthcare (UK). Insulin was purchased from Eli Lilly (IN, USA). Two siRNA duplexes against mouse Akt2, #1 (Genosys (MO, USA), Mm_AKT2_4936; 5´-GAGAUGUGGUGUACCGUG-3´) and #2 (Genosys, Mm_AKT2_4937; 5´-GACUCUUCCACAUCUGAG-3´), and a mixture of non-targeting control (NC) siRNA duplexes (Dharmacon (CO, USA), D-001206-13; Duplex 1, 5´-AUGAACGUGAAUUGCUCAAUU-3´; Duplex 2, 5´-UAAGGCUAUGAAGAGAUACUU-3´; Duplex 3, 5´-AUGUAUUGGCCUGUAUUAGUU-3´; and Duplex 4, 5´-UAGCGACUAAACACAUCAAUU-3´) were commercially obtained.
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