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5 protocols using biotinylated horse antirabbit secondary antibody

1

Quantifying Integrin-Binding Protein Availability

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The availability of
FN adsorbed on polymer surfaces as well as that of the RGD and synergy
domains was determined by ELISA. Samples were blocked for 30 min with
1% w/v BSA (Sigma-Aldrich). To determine the availability of FN, we
incubated rabbit polyclonal anti-FN antibody (Sigma-Aldrich, 1:10 000)
for 1 h, followed by a 1 h incubation with biotinylated horse antirabbit
secondary antibody (Vectorlabs, 1:10 000), both at room temperature
(RT). Samples were then incubated with HRP-streptavidin (R&D Systems)
for 20 min, washed, and incubated with HRP substrate (R&D Systems)
for 20 min. After stopping the reaction, using the stop solution,
absorbance was measured at 450 (maximal absorbance of the tag) and
540 nm (blank control, to determine background absorbance). To assess
the availability of cell-binding domains, we incubated samples at
RT with monoclonal mouse primary antibody (mAb1937, 1:20,000 in 1%
BSA or HFN 7.1 antibody for the synergy or RGD domain, respectively).
The samples were then washed with 0.5% Tween 20 and incubated with
goat antimouse HRP-tagged secondary antibody (1:10 000 in 1%
BSA solution) for 1 h (RT). After washing with 0.5% Tween 20, samples
were incubated with HRP substrate solution in the absence of light
for 20 min. The reaction was terminated with stop solution (R&D
Systems) and absorbance was measured.
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2

Immunohistochemical Analysis of KI-67

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KI-67 antibody staining was performed using a mouse anti-KI-67 (Novocastra, Chicago, IL) for 1 hour at 37°C. Biotinylated horse anti-rabbit secondary antibody (Vector Labs, Burlingame, CA) with streptavidin rhodamine was used. Mounting media with DAPI (Vector Labs, Burlingame, CA) was used as a counterstain.
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3

Temporal Ridge Shaving and Rat FPI

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Similar to the mFPI surgical procedure describe above, a new cohort of rats (n = 9) was prepared for injury induction. In addition to the procedures above, none (n = 3), the rat's anatomical left (n = 3), or both (n = 3) temporal ridge(s) of the skull were shaved by manual scraping to approximate the thickness of the calvarium. Rats were randomly assigned to have the temporal ridges shaved and administered a moderate FPI. At 7 DPI, rats were given an overdose of sodium pentobarbital and transcardially perfused with 4% paraformaldehyde/phosphate-buffered saline. Brains were cryosectioned at 20 μm, wet-mounted onto gelatinized glass slides, and stained for ionized calcium-binding adaptor molecule 1 (Iba-1; rabbit primary antibody IBA-1, 1:1000, Item #0199-19741; Wako Chemicals, Richmond, VA; biotinylated horse antirabbit secondary antibody, 1:250; Vector Laboratories, Burlingame, CA) with diaminobenzidine visualization. Sections depicting individual bregma levels were chosen to present discrete anatomical locations, including the primary motor, CA3 hippocampus, and ventral posterior thalamus, based on anatomical coordinates using the Watson and Paxinos Rat Brain Atlas. Once identified, immunostained slides were imaged (Olympus AX80 Automatic Research microscope with attached DP70 digital camera; Olympus Corporation, Tokyo, Japan).
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4

Quantifying Fibronectin Availability and Synergy

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Overall FN availability as well as the exposure of the synergy
binding sites on the materials were investigated by indirect enzyme-linked
immunosorbent assay (ELISA). Samples were blocked in a DPBS/1%BSA
solution (BB) and incubated with the primary rabbit polyclonal antibodies.
To determine the availability of FN, rabbit polyclonal anti-FN antibody
(1:10 000, Sigma-Aldrich) was incubated for 1 h, followed by
1 h incubation with biotinylated horse antirabbit secondary antibody
(1:10 000, Vectorlabs), both at room temperature (RT). For
the synergy domain samples were incubated with the mAb1937 antibody
(1:20 000) (Sigma-Aldrich) in BB for 1 h at RT. Then, they were incubated
with goat antimouse HRP-tagged secondary antibody (1:10 000) (Vectorlabs)
in BB for 1 h at RT. After transferring the samples to another plate,
HRP substrate reagent solution (A and B substrates, R&D Systems)
was used for 20 min in the dark and finally reaction was stopped using
stop solution (R&D Systems). Samples were washed several times
with DPBS/0.5% Tween 20 between steps. Absorbance for both domains
was measured at 450 nm (maximum absorbance) and 540 nm (background
absorbance) with a Tecan Infinite M200 Pro (Switzerland) plate reader,
using 3 replicates per composition for each domain.
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5

Immunohistochemistry for Parvovirus Detection

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Immunohistochemistry (IHC) using rabbit antiserum against parvovirus (provided by C. Parrish) was performed on those cases and controls that were PV sequence positive. 5 Sections of myocardium (5 mm) were deparaffinized, rehydrated, and blocked for endogenous peroxidase (3% H 2 O 2 ). Antigen retrieval consisted of microwaving slides in Antigen Unmasking Solution (Vector Laboratories, Burlingame, CA) for 20 minutes. Sections were incubated in Avidin, Biotin, and Protein block (Dako, Carpinteria, CA) before incubation with a 1:10 000 dilution of antiserum at 4 C. Sections were incubated with 1:200 Biotinylated horse anti-rabbit secondary antibody (Vector Laboratories) for 30 minutes at room temperature. Sections were incubated with Vectastain ABC Elite reagent (Vector Laboratories) for 30 minutes at room temperature followed by DAB chromogen (Dako) and Mayer's hematoxylin counterstain. Canine intestinal tissue with parvoviral enteritis (confirmed by IHC and virus isolation) and sections incubated without primary antibody served as controls.
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