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4 protocols using ab236256

1

Immunohistochemical Detection of PD-L1 and IFIT1

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Paraffin-embedded colon tissues were deparaffinized and rehydrated. After antigen retrieval and endogenous peroxidase block, the sections were blocked with goat serum, incubated with primary antibodies overnight and incubated with secondary antibody for 30 minutes. DAB was used as chromogen and hematoxylin was used for nucleus counterstaining. Immunohistochemistry (IHC) staining score was assessed under 200X microscope. The antibodies used in the experiment are listed as follow: Rabbit anti-PD-L1 (CAT#17952-1-AP, Proteintech), 1:200 dilution; Rabbit anti- IFIT1 (CAT#ab236256, abcam), 1:50 dilution.
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2

Western Blot Analysis of IFIT1 and PARM-1

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Cells were collected, lysed in lysate (phosphatase inhibitor, protease inhibitor and PMSF), and protein quantification was performed by BCA method (Thermo Fisher Scientific, China). 10-20 μg protein was loaded on 8%-12% 30% acrylamide-Bis gel, then transferred through 0.22 μm pore PVDF membrane (Merck Millipore, USA), and blocked with 5% nonfat milk powder for 1 h., respectively, add primary antibodies (Rabbit polyclonal to IFIT1, 1:1000, ab236256; Rabbit monoclonal [EPR10009] to PARM-1, 1:1000, ab168369, abcam) and incubate overnight at 4°C. The next day, secondary antibodies (Goat Anti-Rabbit actin, 1:2000, ab8226, abcam) were added and incubated at room temperature for 1 h, and then luminescent solution (Thermo Fisher Scientific, China) was added for exposure and color development. Image J software was used for analysis, and the relative protein content was expressed as the gray value of the corresponding protein band/the gray value of the actin protein band, which was repeated three times.
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3

Comprehensive Protein Detection Protocol

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Protein extracts were prepared with RIPA Lysis buffer (Millipore) containing 50 mM Tris–HCl, pH 7.4, 1% Nonidet P-40, 0.25% sodium deoxycholate, 500 mM NaCl, 1 mM EDTA, and 1 × protease inhibitor cocktail (Roche Applied Science). To detect LGALS3BP secreted protein, cell supernatant with trichloroacetic acid precipitation was prepared according to protocol [113 (link)]. The protein extracts were resolved by SDS-PAGE, transferred to a PVDF membrane, and incubated with the indicated antibodies. Detections were performed using ECL reagents. The antibodies used are as follows: custom-designed mouse monoclonal antibody against BORIS, mouse monoclonal antibody against CTCF (Santa Cruz, sc-271514), mouse monoclonal antibody against Tubulin (Abcam, ab7291), rabbit polyclonal antibody against SRCAP (Kerafast, ESL103), Rabbit IgG (Abcam, ab37415), rabbit monoclonal against histone H3 (Abcam, ab201456), rabbit monoclonal against LINE-1 ORF1p (Abcam, ab216324), rabbit monoclonal against IRF7 (Thermo Fisher Scientific, SC0617), rabbit polyclonal against LGALS3BP (Thermo Fisher Scientific, PA5-79597), rabbit polyclonal against IFIT1 (Abcam, ab236256), rabbit polyclonal against IFI44 (Thermo Fisher Scientific, PA5-96967), rabbit polyclonal against Aim2 (Cell Signaling, #63660), rabbit polyclonal against OAS1 (MyBioSource, MBS129033).
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4

Western Blot Analysis of Osteoclast Markers

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The proteins were extracted using RIPA Lysis Solution (P0013 C, Beyotime, Shanghai, China) and protein concentrations were measured using a bicinchoninic acid protein assay kit (KeyGen Biotech Co., Ltd, Nanjing, China). The proteins were separated by SDS-PAGE and transferred onto polyvinylidene fluoride membranes (Roche, Switzerland). The membranes were incubated with the following primary antibodies: IFIT1 (ab236256, Abcam, USA), ATP6V0D2 (H00245972-M01A, Abnova, Shanghai, China), DC-STAMP (ab238151, Abcam), ATP6i (H00000525-M02, Abnova), CTSK (H00001513-M01, Abnova), TRAP (ab2721, Abcam), p-JAK1 (ab138005, Abcam), JAK1 (ab133666, Abcam), p-STAT3 (ab267373, Abcam), STAT3 (ab68153, Abcam), c-Fos (ab222699, Abcam), MMP9 (ab76003, Abcam), NFATc1 (GTX09510, GeneTex, USA), and β-actin (C1313, Applygen, Beijing, China). After a 12 h incubation, the membranes were incubated with the secondary antibody, and the intensity of protein expression was detected by ChemiScope 3300 Mini (CLINX, Shanghai, China) using enhanced chemiluminescence (Beyotime, Beijing, China).
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