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Anti tata binding protein tbp

Manufactured by Cell Signaling Technology

The Anti-TATA-binding protein (TBP) is a primary component of the transcription initiation complex and plays a crucial role in the regulation of gene expression. This antibody can be used to detect and study the TBP protein.

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4 protocols using anti tata binding protein tbp

1

Quantifying Nuclear and Cytoplasmic Proteins in MDA-MB-231 Cells

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Nuclear and cytoplasmic protein lysates were isolated from MDA-MB-231 bone cells after 72 hr treatment with GANT58 (0–20 μM) using NE-PER Nuclear and Cytoplasmic Extraction Reagents (Thermo Scientific) supplemented with Halt Protease and Phosphatase Inhibitor Cocktail (Thermo Scientific). Protein concentrations were quantified using the Pierce BCA Protein Assay Kit (Thermo Scientific). Protein samples (20 μg/well) were separated on a 4–20% Mini-PROTEAN TGX polyacrylamide gel (Bio-Rad) by SDS-PAGE prior to being transferred to a nitrocellulose membrane (Bio-Rad) with the Trans-Blot Turbo Transfer System (Bio-Rad). Membranes were then blocked for 1 hr in 1X TBS containing 0.1% Tween-20 and 5% w/v BSA and incubated with the following primary antibodies at 4°C overnight: anti-Gli2 (1:500, Novus Biologicals), anti-TATA binding protein (TBP) (1:1000, Cell Signaling), or anti-Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1:5000, Cell Signaling). Following incubation with anti-rabbit IgG HRP-linked secondary antibody (Cell Signaling) at room temperature for 1 hr, protein bands were developed by Western Lightning Plus-ECL (Perkin Elmer) and imaged on a ChemiDoc MP Imaging System (Bio-Rad). The intensity of each band was determined by densitometry using ImageJ software.
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2

Western Blotting Analysis of Protein Signaling

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Western blotting was performed as described (8 (link)). Antibodies used were mouse anti-GILZ (G-5) (Santa Cruz Biotechnology), rabbit anti-MKP-1 (Millipore, Bedford, MA), mouse anti-β-actin (Sigma-Aldrich), anti-FoxO3a, anti-TATA-binding protein (TBP), anti-phosphorylated (p) p38, anti-pERK1/2 and total ERK, anti-pAkt and total Akt (Cell Signaling Technology, Danvers, MA) as previously described (8 (link), 30 (link)). Membrane blot density was measured by scanning using the Odyssey system (Li-Cor Biotechnology, Lincoln, NE). Densitometry ratios were normalized to appropriate total protein content and results expressed as a ratio.
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3

Subcellular Fractionation and Ube3a Quantification

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Nuclear and cytosolic fractions of cortical samples (Extended Data Fig. 2d) were separated using a commercially available reagent-based technique (Fisher Scientific) according to manufacturer instructions. Proteins were loaded onto 4–15% polyacrylamide gels (Bio-Rad), transferred to PVDF membranes, blocked with 5% nonfat milk in TBS-T, and incubated overnight at 4 degrees with the following antibodies; anti-Ube3a (#7526, Cell Signaling), anti-alpha-Tubulin (#3873, Cell Signaling), and anti-TATA-binding protein (TBP; #8515, Cell Signaling). After TBS-T washes, blots were incubated with species-specific HRP-conjugated secondary antibodies for 1–2 hours at room temperature. Blots were developed with Pico chemiluminescent reagent (Pierce) and digital images were acquired using the gel dock system (Bio-Rad). Following subcellular fractionation, nuclear and cytosolic Ube3a levels were normalized to levels of TBP and alpha-Tubulin, respectively.
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4

Subcellular Fractionation and Ube3a Quantification

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Nuclear and cytosolic fractions of cortical samples (Extended Data Fig. 2d) were separated using a commercially available reagent-based technique (Fisher Scientific) according to manufacturer instructions. Proteins were loaded onto 4–15% polyacrylamide gels (Bio-Rad), transferred to PVDF membranes, blocked with 5% nonfat milk in TBS-T, and incubated overnight at 4 degrees with the following antibodies; anti-Ube3a (#7526, Cell Signaling), anti-alpha-Tubulin (#3873, Cell Signaling), and anti-TATA-binding protein (TBP; #8515, Cell Signaling). After TBS-T washes, blots were incubated with species-specific HRP-conjugated secondary antibodies for 1–2 hours at room temperature. Blots were developed with Pico chemiluminescent reagent (Pierce) and digital images were acquired using the gel dock system (Bio-Rad). Following subcellular fractionation, nuclear and cytosolic Ube3a levels were normalized to levels of TBP and alpha-Tubulin, respectively.
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