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7 protocols using nb120 10454

1

Histone-Stimulated BMEC Protein Analysis

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Total proteins from the histone-stimulated BMECs were extracted using mammalian, protein extraction reagent (Thermo). Protein concentration was determined using a BCA protein assay kit (Thermo). Prepared samples containing proteins (30 μg) were separated by 15% SDS-PAGE and transferred onto a PVDF membrane (85 Volt, 45 min). The membranes were blocked with 3% BSA at room temperature for 2 h and then probed with primary antibodies at 4°C overnight. Subsequently, the membranes were washed three times with TBST and probed with specific secondary antibodies solution for 2 h at room temperature. Finally, the membranes were washed three more times, and blots were developed using the ECL plus Western Blotting Detection System (GE Healthcare, Chalfont St Giles, UK). The blots were analyzed by Image J Software. The following primary antibodies were used: caspase 1 (1 μg/mL in TBST, AB1872, Abcam), caspase 3 (1 μg/mL in TBST, AB4051, Abcam), caspase 11 (1 μg/mL in TBST, NB120-10454, Novus), and NLRP3 (0.2 μg/mL in TBST, Boster, China).
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2

Analyzing Caspase-1 and Caspase-11 Expression

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Cells and supernatant were lysed in RIPA buffer and sample loading buffer containing SDS and 100 mM DTT. Proteins were separated on 8–12% polyacrylamide gels. Following electrophoretic transfer of protein onto PVDF membranes (IPVH00010, Millipore), membranes were blocked in 5% skim milk and incubated with primary antibodies against caspase-1 (1:3,000 dilution, AG-20B-0042, Adipogen), caspase-11 (1:1,000 dilution, NB120-10454, Novus) and GAPDH (1:10,000 dilution, #5174, Cell Signaling Technologies). Membranes were then incubated with HRP-conjugated secondary antibody for 1 h and proteins were visualized using Super Signal Femto substrate (34096, ThermoFisher Scientific).
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3

Inflammasome Pathway Antibody Screening

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Caspase-1 antibody (AB1872) and caspase 3 antibody (AB4051, Abcam) were purchased from Abcam Bio Co., Ltd. Caspase-11 antibody (NB120-10454, Novus) was purchased from Novus Biologicals. NLRP3 antibody was purchased from Boster Bio Co., Ltd, China. Histone type II A and PMA were purchased from the Sigma-Aldrich. DNase I and FLUOS-Annexin V/PI kits were acquired from Hoffmann-La Roche.
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4

Western Blot Analysis of Inflammasome Proteins

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Cell lysates, serum samples and spleen homogenates denatured in loading buffer containing SDS and 100 mM DTT were boiled for 10 min before SDS–PAGE-separated proteins were transferred to PVDF membranes. Immunoblotting with primary antibodies against caspase-1 (1/3,000, kind gift of Dr Peter Vandenabeele, Ghent University), ASC (1/1,000, AG-25B-0006, Adipogen), IL-1β (1/2,000, GTX74034, GeneTex), caspase-11 (1/1,000, NB120-10454, Novus Biologicals), Ub-HRP (1/1,000, sc-8017, Santa Cruz), HMGB1 (1/100, 18256, Abcam), and β-actin (1/20,000, NB600-501H, Novus Biologicals) was followed by secondary anti-rabbit and anti-rat HRP antibodies (1/5,000, 111-035-144 and 112-035-143, Jackson Immunoresearch). Ponceau S Solution was purchased from Sigma-Aldrich.
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5

Western Blot Analysis of Caspase Activation

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BMDMs were lysed in RIPA buffer and sample loading buffer containing SDS and 100 mM DTT. Proteins were separated on 10–12% polyacrylamide gels. Following electrophoretic transfer of protein onto PVDF membranes, membranes were blocked in 5% skim milk and incubated with primary antibodies against caspase-1 (Adipogen, AG-20B-0042), caspase-11 (NB120-10454, Novus), anti-β-actin (#8457; Cell Signaling Technology) followed by secondary anti-rabbit or anti-mouse HRP antibodies (Jackson ImmunoResearch Laboratories).
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6

Comprehensive Necroptosis Signaling Pathway Analysis

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zVAD, HG-9-91-01, and YKL were purchased from MedchemExpress. Necrostatin-1 was from Calbiochem. GSK’872 and SM-164 were from Selleck. Protein A/G Magnetic Beads were purchased from Pierce. Lipofectamine 2000 was from Life Technologies. LPS and poly I:C were purchased from InvivoGen. Mouse and human recombinant TNF were purchased from Novoprotein. Propidium iodide (PI) and cycloheximide (CHX) was from Sigma. Human recombinant RIPK1 and RIPK3 were from AtaGenix. Elisa kits for TNF and IL-1β were purchased from R&D. ADP-Glo kinase assay kit was from Promega. Immunoblotting was performed with following antibody: anti-RIPK1 (610459, BD Biosciences); anti-hRIPK1 S166 (44590, Cell Signaling); anti-mRIPK1 S166 (31122, Cell Signaling); anti-hRIPK3 (13526, Cell Signaling); anti-mRIPK3 (2283, ProSci); anti-hRIPK3 S227 (91702, Cell Signaling); anti-mRIPK3 T231/S232 (91702, Cell Signaling); anti-hMLKL (ab184718, Abcam); anti-mMLKL (AP14272b, ABGENT); anti-hMLKL S358 (ab187091, Abcam); anti-mMLKL S345 (ab196436, Abcam); anti-GAPDH (sc-32233, Santa Cruz); anti-cleaved Caspase-8 Asp387 (8592, Cell Signaling); anti-cleaved Caspase-3 (9661, Cell Signaling); anti-GSDME (ab215191, Abcam), anti-GSDMD (ab209845, Abcam), anti-Caspase-1 (AG-20B-0042-C100, AdipoGen), anti-Caspase-11 (NB120-10454, Novus).
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7

Immunostaining for Apoptotic Markers in BMECs

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BMECs were cultured briefly on cover glasses (pre-treated with poly-L-lysine, 0.1 mg/mL, Sigma-Aldrich) and incubated with histone (50–200 μg/mL) for 16 h. The cells were fixed with 4% (w/v) paraformaldehyde for 30 min and washed three times. After that, the samples treated with antigen retrieval, non-specifically blocked with 3% H2O2 in methanol for 40 min, 5% goat serum/PBS blocked for 45 min and followed by incubation with antibody to caspase 1 (2.5 μg/mL, AB1872, Abcam), caspase 3 (2.5 μg/mL, AB4051, Abcam), caspase 11 (2.5 μg/mL, NB120-10454, Novus), and NLRP3 (0.5 μg/mL, Boster, China) overnight at 4°C and incubated with the secondary antibody (Maxim, KIT9710, China) at room temperature for 30 min. Finally, the samples were visualized with DAB (Maxim, DAB-0031, China) and counterstained with hematoxylin.
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