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4 protocols using α beta actin

1

Autophagy Marker Detection Antibodies

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Rabbit polyclonal antibodies were α-p62 (Cliniscience, PM045), α-NDP52 (AbCam, ab68588), α-LC3B (AbCam ab48394), α-GABARAP (Abgent, AP1821a). Rabbit monoclonal antibodies were α-LC3B (Cell Signalling, 3868P for immunoblotting), α-ubiquitin Lys-63 specific, Apu3 (Merck Millipore, 05–1308), α-ubiquitin Lys-48 specific, Apu2 (Merck Millipore, 05–1307), α-ubiquitin M1 linear-specific, 1E3 (Merck Millipore, 199), α-Atg16L1 D6D5 (Cell Signalling, 8089), α-Rab7 D95F2 (Cell Signalling, 9367). Mouse monoclonal antibodies were α-ubiquitin FK2 (Enzo Life Sciences, PW8810), α-p62 (abcam, 56416), α-LAMP-1 H4A3 (Abcam ab25630), α-beta actin (Sigma, A2228). Goat polyclonal antibodies were α-galectin 8 (R&D systems, AF1305). Secondary antibodies used were Alexa Fluor 488-, or Alexa Fluor 568-, Alexa Fluor 647-conjugated chicken/goat α-rabbit, chicken/goat α-mouse or donkey α-goat (Molecular Probes).
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2

Primary and Secondary Antibodies for Viral Protein Detection

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Commercially available primary antibodies used in this study are as follows: α-Beta Actin (Sigma Aldrich: A5441), α-RTN3 (Santacruz: sc374599), α-PDI (Thermofisher: P7496), α-DENV NS3 (Genetex: GTX629477), α-DENV NS4B (Genetex: GTX124250), α-dsRNA (Scicons: 10010500), α-ZIKV NS2B (Genetex: GTX133318), α-ZIKV NS1 (Genetex: GTX634158), α-ZIKV NS3 (Genetex: GTX133320), α-ZIKV NS4A (Genetex: GTX133704), α-ZIKV NS4B (Genetex: GTX133321), α-ZIKV NS5 (Genetex: GTX133327). Commercially available secondary antibodies and IF reagents used in this study are as follows: Goat anti–rabbit IgG-HRP (Sigma Aldrich: A6154), Goat anti–mouse IgG-HRP (Sigma Aldrich: A4416), Alexa Fluor 488 donkey anti-mouse IgG (Thermofisher: A-21202), Alexa Fluor 488 donkey anti-mouse IgG2a (Thermofisher: A-21131), Alexa Fluor 568 donkey anti-rabbit IgG (Thermofisher: A-10042), Alexa Fluor 568 donkey anti-mouse IgG1 (Thermofisher: A-21124), Alexa Fluor 647 donkey anti-rabbit IgG (Thermofisher: A −31573), ProLong® Gold Antifade Reagent (Cell Signaling Technology: #9071) and DAPI (Sigma Aldrich: D9542). The DENV NS1-specific antibody was produced as described earlier (Welsch et al., 2009 (link)). DENV NS3-, NS4B- and NS5-specific antibodies were used for western blot analyses as described elsewhere (Miller et al., 2006 (link)).
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3

HIV-1 Protein Immunoblotting Protocol

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Virus-containing supernatants (normalised for equal loading by measuring RT activity) or 15 μg of total CD4+ T cell protein lysate were separated by SDS-PAGE, transferred onto nitrocellulose and blocked in PBS with 0.05% Tween 20 (v/v) and 5% skimmed milk (w/v). Blots were probed with rabbit antisera raised against HIV-1 Gag p24 (cat# 0432 donated by Dr G. Reid and obtained from the CFAR), Vpr anti-serum (cat# 3951, NIH ARP), α−P-STAT5 (Tyr694) (D47E7, Cell Signaling Technology), α-STAT5 (D3N2B, Cell Signaling Technology), α-beta-Actin (A2066, Sigma-Aldrich), α-UNG (OTI2C12, OriGene Technologies), α−alpha-Tubulin (T6199, Sigma-Aldrich) and α-DCAF1 antibody (11612-1-AO, Proteintech), followed by goat anti-rabbit or goat anti-mouse IRdye 800CW or 680RD infrared secondary antibody (Abcam) and imaged using an Odyssey Infrared Imager (LI-COR Biosciences) and analysed with Image Studio Lite software.
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4

Antibody Characterization for Cellular Analysis

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The following antibodies from Cell Signaling (USA) were used: monoclonal α-pAMPK, α-tyrosine hydroxylase and polyclonal α-TFAM. Antibodies from other manufacturers include monoclonal α-AMPK and polyclonal α-PGC-1α (Abcam, UK), monoclonal α-PRK8 (Signet/Covance, USA), α-beta-actin (Sigma, USA), α-PARIS (Merck Millipore, USA), α-mouse horseradish peroxidase and α-rabbit horseradish peroxidase (GE Healthcare, UK).
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