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3 protocols using pro preptm protein extraction kit

1

Cell Lysis and Western Blot Analysis

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HCT116 cells were harvested by scraping from the wells and washed twice with cold phosphate buffered saline (PBS). Total cell extracts were prepared using a PRO-PREPTM protein extraction kit (iNtRON Biotechnology, Seongnam-si, Gyeonggi-do, Korea). Lysates were centrifuged at 16,000 rpm at 4 °C for 30 min to obtain the supernatants. Protein concentration was determined by a Bio-Rad protein assay kit (Bio-Rad, Hercules, CA, USA), loaded on 10% SDS-PAGE, and electrophoretically transferred to a polyvinylidene difluoride membrane. The membrane was incubated with primary antibodies overnight at 4 °C, washed three times, and reincubated with peroxidase-labeled secondary antibody for 2 h. A chemiluminescence (ECL) western blot kit (Amersham, Arlington Heights, IL, USA) was used to detect specific proteins.
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2

Western Blot Analysis of Epigenetic Regulators

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Collected OPCs were subjected to western blot analysis using cell lysis buffer (Pro-PREPTM Protein Extraction Kit, iNtRON Biotechnology). Protein level was measured using BCA protein assay (ThermoFisher), and for each lane, the same amount of protein (10 μg/well) was applied to gel. The membranes were incubated with primary antibodies, followed by appropriate secondary antibodies, and then visualized using ECL chemiluminescence (Thermo Scientific). The images were acquired on G-box (SYNGENE). Primary antibodies were used in this study: anti-DNMT1 (1:1000, Cell Signaling Technology (CST)), anti-DNMT3a (1:1000, CST), anti-HDAC1 (1:1000, CST), anti-HDAC2 (1:1000, CST), MBP (1:500, Thermo Scientific) and anti-β-actin (1:5000, Sigma Aldrich). Protein expression level of target was calculated as a ratio relative to β-actin as internal control.
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3

Detecting Intracellular Signaling in Dendritic Cells

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To detect intracellular signaling in DCs, recombinant Enpp2-treated DCs, Enpp2 siRNA-transfected DCs (siEnppP2 DCs), Enpp2 inhibitor (PF8380)-treated DCs, imDCs, and mDCs were lysed using the ProprepTM protein extraction kit (Intron Biotechnology, Gyeonggi, Korea) in the presence of a serine/threonine phosphatase inhibitor cocktail (Sigma-Aldrich). Equal amounts of protein (10 μg) were separated on SDS-PAGE gels, and transferred to PVDF membranes. The membranes were blocked with 5% (w/w) skim milk in TBST, and then incubated with primary antibodies specific for pErk1/2, Erk1/2, p-JNK, JNK2, pp38, p38, NF-κBp65, or GAPDH (all diluted 1:1000; Cell Signaling Technology, Danvers, MA, USA). The membranes were then incubated with an HRP-conjugated secondary antibody (diluted 1:2000; Cell Signaling Technology). To detect Enpp2, a culture supernatant was concentrated by ultracentrifugation. Proteins in samples were separated and transferred to PVDF membranes prior to detection with an anti-ENPP2 antibody (Cayman Chemical, Ann Arbor, MI, USA) and an HRP-conjugated anti-rabbit antibody (Abcam, Cambridge, MA, UK). The membranes were exposed to ECL reagents (Thermo Scientific), and signals were detected using a Luminescent image analyzer (LAS-4000; Fujifilm, Tokyo, Japan).
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