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2 protocols using anti cxcl16

1

Multiparametric Flow Cytometry Analysis of Tumor Immune Microenvironment

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Tumors were digested to single cell suspension enzymatically and filtered twice through 70μm filters. Red blood cells were lysed with ACK solution (Gibco), washed twice with Cell Staining Buffer (BioLegend), and then stained with the fluorophore-conjugated antibodies for 30 min at 4 °C. The excess of unbound antibodies was washed out before acquisition in flow cytometry. Cells were analyzed using ID700 Spectral Cell Analyzer (SONY) and sorted using FACS-ARIA III (BD, Pharmingen). The following antibodies were for flow cytometry: anti-CD45 PAC (30-F11), anti-CD8b APC-Cy7 (YTS156.7.7), anti-CD4 PE(H129.19), anti-NK1.1 APC-Cy7 (PK136), anti-CD11b APC (M1/70), anti-Ly6c PE (HK1.4), anti F4/80 (BM8), anti-CXCR6 APC (SA051D1), anti-GranzymeB, anti-CD90 FITC (30-H12), anti-CD73 APC (TY/11.8), anti-PD-1 APC (RMP1-30) all purchased from BioLegend and used at 1:100 dilution. Anti-CD31-PE (eBioscience, 390, 1:100), anti-GLUT1 (Novus, Fgi.72, 1:100), anti-Cxcl16 (Bioss, BS-1441R, 1:50) and anti-Rabbit IgG AF488 (Invitrogen, A21245, 1:100) were used to identify CAF populations. Ghost Dye Red 710 (Tonbo, Cat #13-0871-T100) was used to exclude dead cells from the analysis.
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2

Quantitative Immunohistochemical Analysis of CXCL16 and LYVE1 in Liver Tissue

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Immunohistochemistry was performed on 3 μm sections obtained from formalin-fixed paraffin-embedded liver tissues of H2O-treated (n = 5) or ABX-treated (n = 5) mice using the Opal 5-color IHC Kit (PerkinElmer, Waltham, MA, USA) according to the manufacturer’s instructions. The following primary antibodies were used: anti-CXCL16 (Bioss Antibodies, Woburn, MA, USA; bs-1441R, rabbit polyclonal, 1/4.000, Opal 620), anti- LYVE1 (Abcam, Cambridge, UK; rabbit polyclonal, 1/15.000, Opal 520). Slides were evaluated using the Vectra® 3 automated, high-throughput quantitative pathology imaging system (PerkinElmer) and the inForm software (PerkinElmer) for segmentation and quantification of CXCL16+/LYVE1+ cells.
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