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9 protocols using nsc23766

1

Murine Bone Marrow Stromal Cell Isolation

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The BM cells were flushed from the femur and tibia of 20 g ICR mice and were filtered through a 70-μm nylon mesh. Then, cells were washed by phosphate-buffered saline (PBS) containing 2% fetal bovine serum (FBS) and cultured with α-minimum essential medium (MEM) (Invitrogen) containing 20% FBS. The medium was all changed on the 2nd day and half changed on the 3rd day. After the first cell passage, the cells were cultured in α-MEM containing 15% FBS. Passages of 3–6 BMSCs were used for experiments. If not specifically stated, cells were collected after treatment with S1P (Cay62570-1, Biomol, Tebu, France) for 24 h, and CAY10444 (S1PR3 inhibitor; 10,005,033, Cayman Chemical, Ann Arbor, MI), MLS-573151 (Cdc42 inhibitor; 0,453,647-3, Cayman Chemical), and NSC-23766 (Rac1 inhibitor; 0,441,977-5, Cayman Chemical) were added 1 h before the addition of S1P.
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2

Murine RAW264.7 Osteoclastogenesis Assay

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Murine RAW264.7 monocytes (ATCC, Rockville, MD) were cultured in a humidified incubator (5% CO2 in air) at 37 °C and maintained on 9-cm diameter uncoated plastic dishes in α-MEM containing 10% (v/v) heat-inactivated fetal bovine serum (FBS) (Atlanta Biologicals, Flowery Branch, GA). For osteoclastogenesis experiments, 1 × 103 cells were seeded on a 96-well tissue culture plate with 1 μg/ml of PGDHC, synthetic cell membrane-permeable C6 ceramide (Avanti Polar Lipids, Alabaster, AL), or non-permeable inert C6 dihydroceramide (Avanti Polar Lipids), in the presence or absence of rRANKL (50 ng/ml, ProSpec, East Brunswick, NJ). In some experiments, a specific Rac1 inhibitor, NSC23766 (1 μM; Cayman Chemical, Ann Arbor, MI), was applied. Five days later, cells were stained for TRAP using a leukocyte acid phosphatase kit (Sigma). TRAP+ cells with more than three nuclei were considered as osteoclasts. TRAP+ multinuclear cells were counted, and the results were expressed as numbers per well.
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3

Kinase Inhibitor Assay Protocol

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ML 141, PF-573228 and aphidicolin were purchased from Sigma-Aldrich (St. Louis, MO) and LIMKi3 from Calbiochem EMD Millipore (Billerica, MA), and Y27632, SB203580, SP600125 and NSC23766 were purchased from Cayman Chemical (Ann Arbor, Michigan). IPA3 was purchased from Tocris Biosciences (Minneapolis, MN) and PDGF-BB (PDGF) from R&D Systems (Minneapolis, MN).
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4

Bone Marrow Cell Transplantation Chimerism

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Prior to injection, 1 × 106 donor bone marrow cells from CD82KO (CD45.2) or WT (CD45.2) were treated with 5 μM EHop-016 (Selleckchem) or 50 μM NSC23766 (Cayman Chemical) in SFEM for 1 h at 37°C. Treated cells were then retroorbitally injected into BoyJ recipient mice (CD45.1). Recipient mice underwent total body irradiation 24 h prior to injection, which was administered as a single dose of 10 Gy. Mice were killed 16 h postinjection to assess chimerism of the bone marrow and peripheral blood. Blood and bone marrow samples were treated with Fc block prior to labeling with directly conjugated fluorescent antibodies FITC CD45.1 (A20; BD Pharmingen) and APC CD45.2 (104; BD Pharmingen) to assess chimerism. Samples were analyzed on the LSR Fortessa (BD Bioscience).
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5

Inhibition of Rho GTPase Signaling

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The following chemical inhibitors were purchased from Cayman Chemical: Cilengitide (No. 22289), NSC23766 (No. 13196), and ML141 (No. 18496). Rhosin (No. 5003/10) was purchased from R&D Systems. DMSO was used as a negative control and purchased from Sigma.
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6

Inhibiting Key Signaling Pathways

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Inhibitors of c-Raf (Kobe2602), Ras (FTaseII), Rac (NSC 23766), and Gβγ (gallein) were purchased from Cayman Chemical Co. Inhibitors of cAMP (SQ22536) and PKA (H89), bafilomycin A1, caveolin (genistein), the selective Gα inhibitor suramin, the PI3K inhibitor wortmannin, and GDP were purchased from Sigma-Aldrich. Anatag3 (ML-224) was obtained from DC Chemicals. Inhibitors of ERK1/2 (PD98059), PKC (Go6983), and Rho (Y-27632) and the nonselective PKC-δ inhibitor rottlerin were purchased from Calbiochem/EMD Millipore. The dynamin inhibitor dynasore, the Gβγ inhibitor hydrobromide, and the endocy-tosis inhibitor PAO were from Tocris Bioscience. The clathrin inhibitor Pitstop was from R&D Systems Inc. The Gαq/11 inhibitor YM-254890 was obtained from Wako Chemicals USA Inc.
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7

Inhibiting Cytoskeletal Dynamics in Cells

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Inhibitors were added to cells prior to imaging at the following concentrations and timepoints: Cdc42 inhibitor ZCL 278 (Cayman Chemical, 14849), 7.5 μM, 2 hours prior to imaging; Rac1 GEF inhibitor NSC 23766 (Cayman Chemical, 13196), 50 μM, 24 hours prior to imaging; Arp2/3 inhibitor CK-666 (Millipore-Sigma, SML0006), 500 μM, 6 hours prior to imaging; actin polymerization inhibitor cytochalasin D (Cayman Chemical, 11330), 10 μM, 1 hour prior to imaging.
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8

Primary Myxofibrosarcoma Cell Lines

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Following guidelines in IRB-approved protocol 02-060, primary myxofibrosarcoma cell lines (MXF8500, MXF2734, MXF8000, and MXF9100) were derived during 2004 to 2011 from fresh human primary myxofibrosarcoma tumor samples using collagenase digestion and established in cell culture. Array CGH was performed on all primary cell lines and compared to array CGH performed on the human tumor tissue from which they were derived so as to verify that the copy number alterations in the cell lines were representative of those found in the original tumor samples. The cell lines were last tested in 2014.
Adipose-derived stem cells (ASCs) were a generous gift from Dr. Jeffrey M. Gimble, and SGBS cells were a generous gift from Dr. Martin Wabitsch. Umbilical cord-derived human mesenchymal stem cells and human dermal fibroblast cells (KEL-FIB) were from ATCC. All cells were grown in a 50:50 mixture of Dulbecco’s modified Eagle’s medium (DMEM) high glucose and F12 medium (DMEM HG/F12) with 10% fetal bovine serum, 2 mM L-glutamine, 100 units/mL penicillin, and 100 μg/mL streptomycin and maintained in a 37°C incubator with 5% CO2. Collagen I was from Sigma and Collagen II from Millipore. NSC23766 and INK128 were obtained from Cayman, EHop-016 from Millipore and Selleckchem, IPA3 from Tocris.
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9

Optimizing Cellular Microenvironment Effects

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Drugs were reconstituted and stored following manufacturers’ recommendations and diluted in culture media to working concentrations. Specifically, 20 μM pan-MMPs inhibitor GM6001(Abcam, ab120845), 30 μM ROCK inhibitor Y27632 (Abcam, ab144494), 10 μM Cdc42 inhibitor ML141 (Calbiochem®, 217708), 50 μM formin inhibitor SMIFH2 (Abcam, ab218296), 50 μM ARP2/3 inhibitor CK666 (Abcam, ab141231), 100 μM Rac1 inhibitor NSC23766, 20 μM Rac1 inhibitor EHT1864 (Cayman, 17258) were used. Fresh media mixed with specific drugs were prepared right before the experiment and replaced daily. In the drug assays, at least two independent experiments were performed with at least two replicates (technical duplicates) in each experiment.
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