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67 protocols using recombinant human il 4

1

NHBE Cell Stimulation Protocol

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Normal human bronchial epithelial (NHBE) cells were purchased from Lonza (Walkersvile, MD) and cultured in serum-free bronchial epithelial growth medium (BEGM, Lonza) at 37°C in a humidified environment containing 5% CO2. NHBE cells were plated in 12-well culture plates coated with collagen (Corning, NY) and grown 40–50% confluence. Before treatment, NHBE cells were maintained in BEGM without hydrocortisone for at least 2 days. NHBE cells were treated with recombinant human IL-4 or IL-13 (100ng/ml, each; R&D systems, Minneapolis, MN) with or without periostin (10 or 100 ng/ml; R&D systems) for 72 hours. Additionally, in each experiment, NHBE cells were stimulated with poly(I:C)(5 μg/ml; InvivoGen, San Diego, CA) at 1 hour after treatment with IL-4, IL-13, and/or periostin. Anti-integrin αVα3 and anti-integrin αVβ5 (2.5μg/ml; R&D systems) were added to confirm reversibility of periostin-induced TSLP production. Cell culture supernatants were collected and used for TSLP protein ELISA (R&D systems, Minneapolis, MN).
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2

Monocyte-Derived Dendritic Cell Generation

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Fifty to 70 ml of blood was taken by venous puncture. Peripheral blood mononuclear cells were isolated from heparinized blood by Ficoll-Paque (GE Healthcare) purification. Briefly, blood was diluted 1:1 with sodium chloride and tubes were centrifuged at 400g for 30 minutes with the brake off. Cells were harvested from the interface of the Ficoll layer, and were washed and enumerated. Monocytes were isolated using anti-CD14 microbeads, according to the manufacturer’s instruction (Miltenyi Biotec, San Diego, CA, USA). Cells were cultured in RPMI 1640 with 10% human serum and L-glutamine, pen/strep, non-essential amino acids, sodium pyruvate, 2-ME, 40 ng/ml of recombinant human IL-4 and 40 ng/ml of recombinant human GM-CSF (both from R&D Systems). Cytokines were replenished on days 3 and 6, and cells were used on day 7. For some experiments, CD4+ T cells were isolated from the CD14- fraction using the T cell isolation II kit (Miltenyi Biotec). Cells were then cultured with MoDCs in the presence or absence or RSV. At 48 hours, RNA was extracted and message levels of IFN-γ, IL-5 and IL-13 were determined by qPCR.
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3

Monocyte Differentiation into Macrophages

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Peripheral blood mononuclear cells were isolated from buffy coats from healthy donors (Blutspende Zürich, Zurich, Switzerland) by density gradient centrifugation using Ficoll-paque PLUS (Cat: 17–1440–02; GE Healthcare). The monocyte population was magnetically enriched by negative selection using the Human Monocyte Isolation Kit II (Cat: 130–091–153; MACS, Miltenyi Biotech). The monocyte purity was >95% as confirmed by FACS analysis with an anti-CD14 antibody (BD Biosciences).
Freshly isolated human monocytes were differentiated into macrophages by incubation with either 50 ng/mL of human M-CSF (Cat: 14–8789) or G-CSF (Cat: 578602) (both from BioLegend) in RPMI medium (Cat: 61870–010; Gibco) supplemented with 1% heat-inactivated human AB serum (Cat: 34005100; Invitrogen), for up to 8 d. 20 ng/mL of recombinant human IL-4 (Cat: 204-IL; R&D Systems) was used as a control to induce M2-type macrophage differentiation and anti-human G-CSF (1 μg/mL, clone BVD13–3A5, Cat: 502101; BioLegend) or isotype control (rat IgG1 Cat: 400401) was used to neutralize G-CSF in MDA-MB-231 conditioned medium.
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4

Osteogenesis of hASCs under Hypoxia and Cytokines

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HASCs (10 × 103 cells/cm2) were seeded into 24‐wells plates and cultured in αMEM containing 1% PSF, 10 IU/ml heparin, and 2% human PL in a humidified atmosphere containing 20% O2 (normoxia [standard condition]) or 1% O2 (hypoxia), and allowed to attach for 24 hr at 37°C. The next day, the medium was replaced with osteogenic medium, consisting of αMEM with 1% PSF, 10 IU/ml heparin, 2% human PL, 50 µM ascorbic acid‐2‐phosphate (vitamin C; Sigma‐Aldrich), 5 mM β‐glycerophosphate (Sigma‐Aldrich) and 10 nM 1,25‐(OH)2vitamin D3 (Sigma‐Aldrich). Recombinant human IL‐4 (R&D Systems, Minneapolis, MN), and/or recombinant human IL‐6 (R&D Systems) and recombinant human IL‐6Rα (R&D Systems) were added to the osteogenic medium. IL‐4 or IL‐6 were added in a final concentration of 1 and 10 ng/ml, respectively, and IL‐4 in combination with IL‐6 in a final concentration of 10 ng/ml. After addition of osteogenic medium supplemented with the cytokines, hASCs were incubated in 1% O2 or 20% O2 at 37°C during 3 days. Then, the medium was replaced by osteogenic medium without cytokines, and refreshed every 3 days during 11 days. hASCs were harvested after 2, 7, and 14 days of culture for analysis of proliferation, osteogenic differentiation, and VEGF expression as described below.
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Cytokine-Induced Cell Culture Protocols

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The acquisition of the reagents and media were as follows: Roswell Park Memorial Institute-1640 (RPMI-1640) medium with Ultraglutamine from Lonza (Verviers, Belgium); fetal bovine serum (FBS) from GE Health Care Life Sciences (GE Health Care, UT, USA), 2-mercaptoethanol from VWR International (Leuven, Belgium); Dulbecco’s Modified Eagle Medium/F-12 Nutrient Mixture (Ham) (DMEM/F-12; 1:1) from Gibco (Paisley, UK); phosphate-buffered saline (PBS) from Fisher Reagent (Geel, Belgium); dimethyl sulfoxide (DMSO) and phosphoric acid from Merk (Darmstadt, Germany); dimethylformamide (DMF) from Romil (Cambridge, UK), TripleXtractor and RNA Kit—Blood & Cultured Cells from GRiSP (Porto, Portugal), recombinant human IL-4 from R&D Systems (Minneapolis, USA). High-Capacity RNA-to-cDNA Kit and Master Mix from Applied Biosystems (Foster City, CA, USA) were used. When not specified, the reagents were from Sigma-Aldrich (ST. Louis, MO, USA).
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NHBE Cell Culture and Stimulation

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NHBE culture was performed as previously described (40 (link)). Briefly, primary NHBEs (Lonza, Basel, Switzerland) of four genetically independent donors were grown as monolayers in 100% humidity and 5% CO2 at 37 °C in serum-free defined growth media (BEGM, Lonza). NHBEs (passage 3) were used at ∼80% confluence in 6-well plates. To avoid gene expression changes or influences by growth factors in the BEGM medium, cells were rested in basal medium (BEBM, Lonza) for 12 h, then stimulated with HDM extract at a final concentration of 40µg/mL (CITEQ), recombinant human IL-4 at 50 ng/ml (R&D Systems, Minneapolis, MN, USA) for 6 h. When indicated, cells were pretreated for two h prior to stimulation with the AhR inhibitor CH-223191 (Sigma-Aldrich) at a concentration of 1µM/mL. For RNA analysis, harvested cells were lysed in RLT buffer (Qiagen, Hilden, Germany) containing 1% β-mercaptoethanol (Roth, Karlsruhe, Germany) directly in the cell culture well.
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7

Generation of Dendritic Cells from Monocytes

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Buffy coats were bought from the Blood Transfusion Clinic at the Karolinska University Hospital, and monocytes were isolated from the buffy coats using commercial kits (RosetteSep Human Monocyte Enrichment Cocktail solution, Stemcell, Grenoble, France) and density gradient centrifugation on lymphoprep (Fresenius Kabi Norge AS, Oslo, Norway). To generate DC, the purified monocytes were cultured in RPMI 1640 medium containing GlutaMAX (Invitrogen Gibco, Paisly, UK) supplemented with 10% fetal bovine serum (HyClone,, Logan, UT, USA), 100 µg/mL streptomycin and 100 U/mL penicillin (Invitrogen Gibco), 250 ng/ml of recombinant human granulocyte-macrophage colony-stimulating factor (GM-CSF) (R&D systems or PeproTech, London, UK) and 6.5 ng/ml of recombinant human IL-4 (R&D systems). RPMI 1640 is described above, but without GM-CSF and IL-4 is referred to as complete RPMI, whereas RPMI 1640 with no supplementary agents is referred to as incomplete RPMI. On day 3 of culture, half of the medium was replaced with fresh complete RPMI containing IL-4 and GM-CSF. On day 6 or 7 the cells were harvested and washed with incomplete RPMI medium. The cell population used for the experiments described below typically contained >70% CD14− CD1a+ live cells, assessed by flow cytometry (data not shown).
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8

Naive B Cell Activation Assay

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Human naive B cells (>95% pure) were purified by negative selection, using the EasySep Human Naive B Cell Enrichment Kit (19254; StemCell Technologies), from healthy donor peripheral blood mononuclear cells, following the manufacturer's instructions. Naive B cells were then cultured in FBS–RPMI and stimulated with mCD154 (1, 2 or 4 U ml−1), recombinant human IL-4 (20 ng ml−1; R&D Systems) and recombinant human IL-21 (50 ng ml−1; R&D Systems) for 24, 48, 72 and 96 h. RNA was extracted from stimulated and unstimulated B cells and used for qRT–PCR analysis.
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9

Fura-2 Calcium Imaging of Dissociated DRG Neurons

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Human DRG were recovered in the operating room and transported in N-methyl-D-glucamine (NMDG) artificial cerebrospinal fluid (aCSF) solution where they were dissociated and plated on glass coverslips following the procedures described in Valtcheva et al., 2016 (link). Neurons were incubated for 3 days in media containing Neurobasal-A supplemented with B-27, 100 U/mL penicillin plus streptomycin, 2 mM Glutamax (Gibco), and 5% FBS at 37°C and 5% CO2. Fura-2 AM (3 μg in 3 μL DMSO) was administered to coverslips in 1 mL of media and after 45 minutes, coverslips were moved to external solution containing (in mM): 130 NaCl, 5 KCl, 2 CaCl2, 1 MgCl2, 30 glucose, 10 HEPES for calcium imaging following the protocols in Valtcheva et al., 2016 (link). Calcium imaging was performed on an Olympus BX51 microscope with Rolera Bolt camera (Q-Imaging) and a CoolLED pE-4000 (365/385) illumination system controlled via MetaFluor software (Molecular Devices). Recombinant human IL-4 (300 nM, R&D Systems), capsaicin (500 nM) and KCl (50 mM) were administered to the bath.
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10

Isolation and Differentiation of Human Dendritic Cells

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Blood buffy coats were obtained from healthy volunteers after informed consent was obtained. The study protocol and any amendments were reviewed and approved by an independent review board (New England IRB, Newton, MA) before the start of the study. This study was conducted in accordance with the ethical principles of the Declaration of Helsinki.
PBMCs were freshly isolated from blood by Ficoll-Hypaque gradient centrifugation as previously described (39 (link)). Monocyte-derived dendritic cells were differentiated in vitro from freshly isolated human monocytes as previously described (39 (link)). Briefly, CD14+ monocytes were isolated from freshly purified PBMCs by negative selection and magnetic bead sorting (Miltenyi). Cells were then incubated in complete RPMI 1640 in the presence of 50 ng/ml recombinant human granulocyte-macrophage colony-stimulating factor and 20 ng/ml recombinant human IL-4 (R&D Systems) for 7 days. For all experiments using human donor cells, data were generated independently with at least two donors. A representative data set was selected for incorporation into the figure.
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