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2 protocols using hpa001240

1

Western Blot Analysis of Protein Targets

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Untreated or specifically treated cells were washed twice with cold PBS and harvested in RIPA lysis buffer supplemented with 1% protease inhibitor. Cells were scrapped, lysates were collected, homogenized with syringe and needle, and centrifuged at 30,000 x g for 5 min at 4 °C. Clear lysate was transferred to a new tube. Protein concentration of lysate was determined using the DC assay (BioRad). Protein samples were resolved by SDS-PAGE and transferred to a nitrocellulose membrane (GE Healthcare).
Primary antibodies used: CBS (1:1000, sc-133154, Santa Cruz Biotechnology), MPST (1:4000, HPA001240, Sigma Aldrich), CTH (MEF cells, 1:4000), CTH (HeLa cells, 1:1000, sc-374249, Santa Cruz Biotechnology), p-ERK (1:1000, sc-7383, Santa Cruz Biotechnology), total-ERK (1:1000, sc-271269, Santa Cruz Biotechnology), DJ-1 (1:250, sc-55572, Santa Cruz Biotechnology), DJ-1 Oxidized At C106 (1:1000, HCA024, BioRad) and β-tubulin (1:5000, T0198, Sigma Aldrich). Species-specific horseradish-conjugated secondary antibodies (1:5000, Santa Cruz Biotechnology) were used for antigen detection and visualized using Clarity™ Western ECL Substrate (BioRad) on a G:Box Chemi-XT4 (Syngene).
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2

Mitochondrial Protein Immunoblotting

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Subsequently, membranes were blocked using Li-COR Blocking Buffer (Li-COR, Lincoln, NE) for 1 hour at room temp. Mitochondrial proteins were probed for with the following primary antibodies: 3-mercaptopyruvate sulfurtransferase (3MPST, HPA001240, Sigma), mitochondrial heat shock protein 70 (mtHSP70, ab6535, Abcam), GrpE protein homolog 1 (Grpel1, sc-242966, Santa Cruz), Sirtuin 3 (SIRT3, ab86671, Cell Signaling), superoxide dismutase 2 (SOD2, sc-30080, Santa Cruz), and glutathione reductase (GR, ab16801, Abcam).Soluble proteins were probed for with the following primary antibodies: heat shock protein 70 (HSP70, ab6535, Abcam) and superoxide dismutase 1 (SOD1) (sc-11407, Santa Cruz). All primary antibodies were diluted in Li-COR Blocking Buffer at a 1:1000 ratio, with the exception of Grpel1 (1:200 ratio). Incubations were performed overnight at 4°C. Then membranes were washed in TBS-T (3 ˣ 5 min), and incubated in secondary antibody (IR Dye, 1:20,000, LI-COR) for 30 min at room temp, washed again (TBS-T, 3 ˣ 5 min), and rinsed in 1 ˣ TBS. Finally, membranes were scanned using an Odyssey Infrared Imaging System (LI-COR). For mitochondrial proteins, the immunoblot signal of each target protein was normalized to cytochrome c signals (Cyt c, sc-13156, Santa Cruz) and soluble proteins were normalized to ɑ-tubulin signals (12G10, DSHB).
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