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Primescript rt reagent kit

Manufactured by Bio-Rad
Sourced in United States, China

The PrimeScript RT reagent kit is a reverse transcription kit designed for the conversion of RNA into cDNA. The kit includes the necessary reagents and enzymes to perform this process efficiently.

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24 protocols using primescript rt reagent kit

1

Quantifying lncRNA and mRNA Levels

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For the collection of total RNAs, the TRIzol Reagent (Invitrogen, Pudong, Shanghai, China) was used based on product guides. PrimeScript RT Reagent Kit (Bio-Rad, Aiyan Biology, Minhang, China) was applied to synthesize complementary DNA. By the use of a PrimeScript™ RT Reagent Kit (Bio-Rad, Aiyan Biology, Minhang, China), one microgram of total RNA was reverse transcribed in a final volume of 25 μl. The relative levels of lncRNAs and mRNAs were determined by RT-PCR, which was carried out by the use of the ABI Power SYBR Green PCR Master Mix (Applied Biosystems, China). U6 and GAPDH were applied as internal controls. The relative expressions of the target genes were assessed via 2−ΔΔCt methods. All primer sequences are listed in Table 1.
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2

Quantitative RT-PCR Analysis of Gene Expression

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Total RNA from the treated splenocytes was extracted using TRIzol reagent (Qiagen, Hilden, Germany) and quantified using the Nanodrop 2000 spectrophotometer (Thermo Fisher Scientific, Waltham, MA, USA). For the detection of mRNA, 2 μg of total RNA was reversely transcribed into cDNA using PrimeScript RT reagent Kit (Bio-Rad, Hercules, CA, USA). Subsequently, RT-PCR was performed with SYBR Prime Script RT-PCR Kits (TaKaRa, Otsu, Shiga, Japan) on an ABI PRISM 7900 Real-Time system (Applied Biosystems, Foster City, CA, USA), with GAPDH as an endogenous control. The reaction protocol was as follows: denaturation at 95 °C for 10 min, followed by 40 cycles of denaturation 95 °C for 30 s, annealing at 60 °C for 1 min and extending at 72 °C for 30 s. The relative gene expression was calculated using the 2−∆∆Ct method.
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3

Quantitative PCR Analysis of miRNA and mRNA

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Total RNA was extracted from cells or ovarian tissue using Trizol reagent (Life Technologies). Subsequently, 2 μg of RNA was reverse-transcribed into cDNA using the PrimeScript RT reagent kit (Bio-Rad, Hercules, CA, USA), and quantitative real-time PCR (qRT-PCR) was performed on a MyiQ Single-Color Real-Time PCR Detection System (Bio-Rad). The miR-181a and mRNA expression levels were normalized to U6 small nuclear RNA and 18S, respectively, using the 2−△△CT method as previously described.22 (link) The specific primer sequences are listed in Table 1.
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4

Quantitative Analysis of Fucosyltransferase Gene Expression

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Total RNA was isolated from tissues using trizol reagent, followed by cDNA synthesis using a Prime Script RT Reagent Kit in a Bio-Rad thermocycler. The obtained cDNA was amplified in 20 μL of qPCR reaction mixture in accordance with the manufacturer’s instructions, qPCR reactions were performed in CFX96™ Real Time Detection System using SYBR Green method. GAPDH was acted as endogenous control. The following primers were used: FUT2 5’-GTGGTGTTTGCTGGCGATGG-3’ (forward primer) and 5’-AAAGATTTTGAGGAAAGGGGAGTCG-3’ (reverse primer), FUT4 5’-AGAAAGGTGAGGAGGGCAGT-3’ (forward primer) and 5’-CCAAGGACAATCCAGCACTT-3’ (reverse primer), FUT7 5’-CCTCACCTTGGGCAGAGATA-3’ (forward primer) and 5’-CCAGCATTATTCATCCACAGTC-3’ (reverse primer), FUT8 5’-ACTGGTGGATGGGAGACTGTAT-3’ (forward primer) and 5’-AGGACGGGGATGAAGACTGT-3’ (reverse primer), GAPDH 5’-GAACATCATCCCTGCCTCTACT-3’ (forward primer) and 5’-CCTGCTTCACCACCTTCTTG-3’ (reverse primer).
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5

Validating Unigenes Expression via qRT-PCR

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Sixteen unigenes (10 unigenes for original transcriptome verification and six unigenes for commercial insecticide verification) were selected and validated by quantitative real-time PCR (qRT-PCR) on a CFX-96 Real-Time PCR Detection System (Bio-Rad, Berkeley, CA, USA) with specific primers designed by Primer Premier 5.0 (Table S1). The cDNA template used for RT-qPCR was reverse-transcribed from qualified total RNA using the Prime Script RT Reagent Kit (Bio-Rad, Berkeley, CA, USA). A 20 µL PCR reaction volume contained 10 µL of Bio-Rad iTaq™ Universal SYBR® Green Super mix (2 ×), 1 µL of each gene-specific primer (10 µM), 2 µL of each cDNA template and 6 µL of ddH2O. Actin was used as a reference gene and the 2−ΔΔCt method was employed to estimate relative changes in gene expression (Livak & Schmittgen, 2001 (link); Chang et al., 2017a (link)). Each treatment included four replicates, and each sample was assessed in triplicate. Significant differences among treatments were detected by one-way ANOVA, followed by Tukey’s multiple comparison and analysis with SPSS v. 16.0 (SPSS, Chicago, IL, USA); significant differences were determined at P < 0.05.
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6

Total RNA Extraction and RT-qPCR Analysis

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Cells were washed by PBS and 1ml/ 3.5cm diameter well, tissues were crushed by pestle and mortal, then add 2ml/ 1g Trizol (Introvergen). Total RNA was extracted from tissues or cells, according to the manufacturer's instructions. Reverse-transcription PCR (RT-PCR) was carried out with the Prime-Script RT Reagent Kit (Bio-Rad). Expression levels of the genes were determined by real-time quantitative PCR and normalized against an endogenous control GAPDH using SYBR supermix (Bio-Rad). Data were analyzed using a ΔΔCq approach.
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7

Quantitative RT-PCR Analysis of Gene Expression

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TRIZOL reagent (Invitrogen, Haidian, Beijing, China) was applied to the extraction of total RNAs from cultured cells or frozen samples. Under the support of PrimeScript RT Reagent Kit (Bio-Rad, Hangzhou, Zhejiang, China), synthesis of complementary DNA (cDNA) was conducted. Next, on ABI 7500 using SYBR Premix ExTaq II kit (Takara, Hangzhou, Zhejiang, China), we performed qRT-PCR assays. The qRT-PCR data were analyzed, and calculated via the 2−ΔΔCt methods. For normalization, GAPDH served as an endogenous control. Table 1 presented the used PCR primer sequences.
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8

Quantitative RT-PCR Analysis of PC12 Cells

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PC12 cells were cultured in 12-well plates (2 × 105 cells) at 37 °C and 5% CO2. Total mRNA was extracted using Sepazole RNA II Super, and cDNA was synthesized using a S1000 thermal cycler (Bio-rad, Hercules, CA, USA) with a Prime Script RT reagent kit. The PCR products were analyzed with Thermal Cycler Dice (Takara Bio) using SYBR Premix Ex Taq II and predesigned primers.
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9

Quantification of Adhesion and Osteogenesis Genes

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qRT‒PCR was used to quantify the mRNA expression of adhesion-related and osteogenic differentiation-related genes in the cells of each group. After culture for 2 or 6 h, total RNA was extracted from the cells according to the manufacturer’s protocol (Takara, USA). Nanodrop plates (Tecan Infinite M200, USA) were used to measure the concentration and purity of RNA. The RNA content in each group was adjusted to 1 μg, and reverse transcription was performed using the PrimeScript RT Reagent Kit (Bio-Rad, USA). qRT‒PCR was performed with a CFX96 fluorescence quantitative PCR machine (Bio-Rad, USA), and the key adhesion-related genes integrin β1, vinculin, intercellular cell adhesion molecule-1 (ICAM-1), and vascular cell adhesion molecule-1 (VCAM-1) were assessed. β-actin was used as the reference gene to standardize the expression levels of other genes. The standard ΔΔCt (threshold cycle) method was used to analyze the experimental data. To detect osteogenic differentiation, the cells were cultured for 5 d following the method outlined above. qRT‒PCR was completed using a SYBR premix EX Taq PCR kit (Takara, Japan) to evaluate the mRNA levels of alkaline phosphatase (ALP), run-related transcription Factor 2 (Runx2), and osteopontin (OPN). The mRNA levels were normalized to the housekeeping gene glyceraldehyde-3-phosphate dehydrogenase (GAPDH).
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10

Quantification of Immune Gene Expression

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Total RNA was isolated from PBMCs from uRM patients in the immunotherapy group using TRIzol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s instructions. cDNA was synthesized using a PrimeScript RT reagent kit (Bio-Rad Laboratories, Hercules, CA, USA). The mRNA-specific oligonucleotide primers used for qRT-PCR analysis were as follows:
IFN-γ, forward 5′- TGCAGAGCCAAATTGTCTCC -3′ and reverse 5′- TGCTTTGCGTTGGACATTCA-3′;
IL-4, forward 5′- TTTGCTGCCTCCAAGAACAC -3′ and reverse 5′- GTCGAGCCGTTTCAGGAATC -3′;
FOXP3, forward 5′- GTGGCCCGGATGTGAGAAG -3′ and reverse 5′- GGAGCCCTTGTCGGATGATG -3′;
and human 18S, forward 5′- CGGCTACCACATCCAAGGAA -3′ and reverse 5′- CTGGAATTACCGCGGCT -3′. Each qRT-PCR reaction comprised the following components: 2 μL cDNA, 2 μL ddH2O, 5 μL SYBR Green PCR Master Mix (Bio-Rad Laboratories, Hercules, CA, USA), and 0.5 μL each of the forward and reverse primers. The qRT-PCR was performed on a MyiQ Single Color Real-Time PCR Detection System (Bio-Rad Laboratories, Hercules, CA, USA) using the following procedure: 95 °C for 3 min; 94 °C for 10 s; 60 °C for 30 s; and 72 °C for 30 s. The fold change in expression of each gene was calculated using the 2-△△CT method, with 18S rRNA used as an internal control.
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