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4 protocols using anti mouse tnf α

1

Measuring Cytokine Levels in Cell Culture

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Cell culture supernatants collected at 48h post infection were aliquoted into 200 μL volumes and frozen at -80°C. An ELISA test was conducted for IFN-γ, IL-6 and TNF-α according to the manufacturer’s instructions (R&D Biosystems). Briefly, wells of Nunc Maxisorp 96-well plates were coated with anti-mouse IL-6 (2 μg/ml), anti-mouse IFN-γ (4 μg/ml) or anti-mouse TNF-α (0.8 μg/ml) (R&D BioSystems) overnight at room temperature. Before use, the plates were blocked with PBS containing 1% bovine serum albumin fraction V (BSA, Sigma) for 2 h at room temperature. Cell culture supernatant samples were added to the wells in a volume of 100 μl and the control samples were diluted in PBS 1% BSA. After the 2 h incubation at room temperature, wells were washed 4 times with PBS containing 0.05% Tween 20. The addition of the biotinylated monoclonal antibodies for each of the cytokines (IL-6 150ng/ml; IFN-γ 300ng/ml; TNF-α 50ng/ml) were added and incubated for 2 h at room temperature. Horseradish peroxidase-conjugated streptavidin (R&D Biosystems) was added according to the manufacturer’s recommendations and incubated for 30 min at room temperature. Standard curves were generated using purified recombinant IL-6, IFN–γ and TNF-α according to the manufacturer’s recommendations (R&D BioSystems) using MaxPro generated 4-parameter curve-fit for each cytokine.
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2

Immunoblotting and ELISA Assays for Inflammatory Signaling

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The anti-Lyn, anti-Src, anti-α-tubulin antibodies and horseradish peroxidase conjugated secondary antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA). The anti-mouse TNF-α, IL-6, and IL-1β ELISA kits were obtained from R&D Systems (Minneapolis, MN). Anti-phospho-tyrosine (4G10) antibody was from Upstate (Temecula, CA), and anti-pLyn (Tyr 396) antibody was purchased from Abcam (Cambridge, MA). Anti-pSrc, Src, pERK, pJNK, p-p38, JNK, p38 and ERK2 antibodies were purchased from Cell Signaling Technology (Danvers, MA). LPS (Lipopolysaccharides from E.Coli 026:B6) was obtained from Sigma-Aldrich Corp. (St. Louis, MO). The LDH cytotoxicity assay kit was from Promega Corporation (Madison, WI). Human Aβ1–42 was purchased from rPeptide (Bogart, GA).
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3

Cytokine ELISA Quantification

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Cell culture supernatants collected at 24 h post infection were dispensed into 200 μl volumes and frozen at −80 °C. An ELISA test was conducted for IL-6, TNF-α and TGF-β1 according to the manufacturer’s instructions (R&D Biosystems, Minneapolis, MN). Briefly, Nunc Maxisorp 96-well plates were coated with anti-mouse IL-6 (2 μg/ml), anti-mouse TNFα (0.8 μg/ml), or TGFβ1 (4 μg/ml) (R&D BioSystems) overnight at room temperature. Before use, the plates were blocked with PBS containing 1% bovine serum albumin fraction V (BSA, Sigma) for 2 h at room temperature. Cell culture supernatant samples (100 μl) were added to the wells and the control samples were diluted in PBS/1% BSA. After 2 h incubation at RT, wells were washed 4 times with PBS containing 0.05% Tween 20. The addition of biotinylated monoclonal antibodies for each of the cytokines (IL-6, 150 ng/ml; TNFα, 50 ng/ml; TGFβ1, 75 ng/ml) were added and incubated for 2 h at room temperature. Horseradish peroxidase-conjugated streptavidin (R&D Biosystems) was added according to the recommended dilution and incubated for 30 min at room temperature. Standard curves were generated using purified recombinant IL-6, TNFα, and TGFβ1 according to the manufacturer’s recommendations (R&D BioSystems) using a MaxPro-generated four-parameter curve-fit for each cytokine.
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4

Cytokine quantification in organ homogenates

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Longitudinally halved stomachs were homogenised (T10 homogeniser, IKA-Werke) in BHI and colony-forming assay performed as described previously. [14] Culture supernatants and organ homogenates (homogenised in PBS or after colony-forming assay) were centrifuged to remove debris prior to quantification of cytokine by ELISA as previously described. [21] Primary antibodies: anti-mouse TNFα (0.1 μg/well; BioLegend), MIP-2 (0.1 μg/well; R&D Systems), IFNγ (0.1 μg/well; BD Biosciences), IL-17A (0.5 μg/well; eBioscience), IL-6 (0.05 μg/well; eBioscience), IL-1β (0.2 μg/well; R&D Systems), IL-10 (0.1 μg/well; BD Biosciences), TGFβ (0.1 μg/well; BD Biosciences) or IL-18 (0.1 μg/well; R&D Systems).
Secondary antibodies: biotinylated anti-mouse TNFα (0.025 μg/well), MIP-2 (3.7 ng/well), IFNγ (0.05 μg/well), IL-17A (0.025 μg/well), IL-6 (0.025 μg/well) IL-1β (0.03 μg/well), IL-10 (0.05 μg/well), TGFβ (0.05 μg/well) or IL-18 (1/2000; same manufacturers as capture antibody). Sample concentration was determined against a standard curve of recombinant cytokine (same manufacturers as antibodies).
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