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2 protocols using blotting buffer

1

Western Blot Analysis of Apoptosis Regulators

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Cell pellets containing 5 × 106 cells were washed with ice-cold phosphate buffer saline and lysed with RIPA buffer (Tris-HCl 50mM, NaCl, 150 mM, NP-40 1%, Sodium Deoxylcholate 0.25%, SDS 0.1%), and fresh protease inhibitor cocktail (Roche) was added. Protein concentration in lysates was determined by BCA assay (Pierce) and 15 μg of protein sample were loaded on polyacrylamide electrophoresis pre-cast gels (BioRad). PVDF membranes were blocked with 5% non-fat dry milk (Blotting buffer, BioRad). Experiments were conducted at least in independent triplicates. Densitometry analysis was performed using ImageJ. We used the following primary antibodies: mouse anti-BCL6 (SC-7388, Santa Cruz), rabbit anti-BCL2 (SC-7382, Santa Cruz), rabbit anti-MCL1 (SC-819, Santa Cruz), rabbit anti-BIM (2933S, Cell Signaling Technologies), rabbit anti-BLC-XL (2764S, Cell Signaling Technologies), mouse anti-GAPDH (ab8245, Abcam), rabbit anti-NOXA (Santa Cruz), mouse anti-tubulin (T9026, Sigma-Aldrich), rabbit anti-BMF (ab181148, Abcam) and rabbit anti-caspase 9 (9502, Cell Signaling Technologies).
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2

Western Blot Analysis of IL-37 Expression

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The protein concentrations of the cell lysate were determined using a DC Protein Assay Kit (Bio-Rad). To detect the expression of IL-37 in IL-37sgRNA and TFneg cells, 50 μg total protein from cell lysates was resolved in 12% Bis/Tris gels (Novex, Life Technologies) in NuPage running buffer (Novex, Life Technologies) and transferred to nitrocellulose membranes in blotting buffer (Bio-Rad). After blocking in 5% bovine serum albumin (BSA, Carl Roth GmbH, Karlsruhe, Germany), nitrocellulose membranes were probed overnight at 4 °C using 3 µg/ml rabbit polyclonal anti-IL-37b (Novus Biologicals, Cambridge, UK). Rabbit polyclonal anti-GAPDH (Santa Cruz Biotechnology, Dallas, Texas) at a 1:15,000 dilution was used as a loading control. Blots were then incubated with a horseradish peroxidase-conjugated secondary anti-rabbit IgG (Santa Cruz Biotechnology, Dallas, TX, USA) and visualized using a Luminata Forte Western HRP substrate (Merck Millipore, Billerica, MA, USA). The membranes were exposed to chemiluminescence using an Odyssey Fc (LI-COR Biosciences, Lincoln, NE, USA). Densitometric analysis was performed using version 3.1 of the Image Studio software package (LI-COR). The calculations were performed based on density of the IL-37 and GAPDH bands, respectively, as detected by the software, and the results were normalized based on IL-37/GAPDH.
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