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2 protocols using 13c nahco3

1

Metabolic Pathway Analysis with Isotopic Labeling

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The following reagents were obtained from Sigma-Aldrich: glucose, 1,3-propanediol, phenylboronic acid, cycloheximide, 23BD, acetoin, pyruvate, PEP, 6PG, G6P, F6P, Ru5P, R15P, ATP, dithiothreitol (DTT), NADH, NADPH, NADP+, phosphocreatine, RuBisCO, pyruvate kinase, lactate dehydrogenase, G6P dehydrogenase, 3PGA kinase, GAPDH and creatine kinase. U-13C glucose and 13C-NaHCO3 were obtained from Cambridge Isotope Laboratories. IPTG and chloramphenicol were obtained from Fischer Scientific. Gentamycin was purchased from Teknova. Spectinomycin was purchased from MP Biomedicals. Kanamycin was purchased from IBI Scientific. Phusion polymerase was purchased from New England Biolabs. All oligonucleotide synthesis and DNA sequencing were performed by Eurofins MWG Operon Inc.
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2

C-Labeling of Bacterial Cultures

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Cultures were grown in four replicates in 2-L flasks containing 1.5-L medium. For 13C labeling, 13C-NaHCO3 (Cambridge Isotope Laboratories) was added to a final concentration of 0.174 g l− 1 to flasks No.1, No.2, No.3, and No.4 at D1, D3, D5, and D7, respectively. Samples were collected at 1 day after labeling (D2, D4, D6, and D8) as described above.
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