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Zen blue v 3

Manufactured by Zeiss

ZEN Blue v.3.0 is a software solution for microscope image acquisition, processing, and analysis. It provides a user-interface for controlling Zeiss microscopes and managing image data.

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2 protocols using zen blue v 3

1

Imaging and Microscope Techniques for Cell Biology

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Most of the images were acquired at room temperature using a Zeiss LSM980 system, equipped with two PMT and one GaAsPand, a ×40 W objective (C-Apochromat ×40/1.1 W Corr M27, Zeiss); same microscope, but a C-Apochromat ×25/1.515 oil immersion objective was used for the TFM experiments. Camera, filter wheels and shutters were controlled by Zeiss’s ZEN Blue v.3.0. Images in Extended Data Fig. 3 and Extended Data Fig. 6 were acquired with a Leica Stellaris 5 confocal system by using a ×63/1.4 oil immersion objective with ×1 or ×0.75 optical zoom, respectively. Images in Extended Data Fig. 7b were acquired in a Leica Thunder by using a HC PL APO ×20/0.80 PH2 objective. Camera, filter wheels and shutters were controlled by built-in Leica softwares.
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2

Microscopy Techniques for Cellular Imaging

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Time-lapse imaging. Images for dispersion assays were acquired every 5 min at 18 °C using an upright microscope Zeiss Imager Z2/Apotome.2 equipped with a motorized stage and a camera (Hamamatsu Orca flash 4.0 v2). A 10×W objective (N-Achroplan 10x/0.3 M27 (FWD=2.6mm), ZEIZZ) was used.
In situ hybridization imaging. All images were captured at room temperature in agarose dishes containing PBS, using a dissecting microscope (MZ FL III, Leica) equipped with a camera (DFL420, Leica) and imaging software (IM50, Leica). Magnification was 3.2×.
Immunofluorescence imaging. All images were acquired at room temperature using a Zeiss LSM980 system, equipped with two PMT and one GaAsPand, a 40×W objective (C-Apochromat 40x/1.1 W Corr M27, ZEIZZ). Camera, filter wheels, and shutters were controlled by Zeiss's ZEN Blue v3.0.
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