Single-cell suspensions were plated and stained for 20 min at 4 °C with a combination of fluorescently labeled antibodies specific for surface markers including CD8α (53–6.7), CD25 (PC61.5), CD11a (M17/4), CD43
glyco (1B11), CD44 (IM7) CD49a (Ha31/8), CD62L (MEL-14), CD69 (H1.2F3), CD103 (2E7), CD122 (5H4), CXCR3 (CXCR3–173), CXCR6 (SA051D1), CX
3CR1 (SA011F11),
KLRG1 (2F1), Thy1.1 (OX-7 or HIS51) and
fixable viability stain (BD Horizon). Antibodies were purchased from BD Bioscience, BioLegend, eBioscience/Thermo Fischer Scientific, or Tonbo biosciences. Cells were fixed with
BD Cytofix (BD Biosciences).
To asses cytokine production, single cells suspensions were plated in the absence (no stim) or in the presence 1 μM OVA(257–264) peptide in the presence of
GolgiPlug (BD Bioscience) for 5 h at 37 °C or detected directly
ex vivo in the absence of
GolgiPlug. Cells were stained for surface molecules including
fixable viability stain (BD Horizon), fixed and permeabilized using the
transcription factor staining buffer kit (Thermo Fisher Scientific) and stained for cytokines including IFN-γ (XMG1.2), TNF (MP6-XT22), and IL-2 (JES6–5H4).
All samples were acquired using
LSRFortessa (BD Bioscience) and analyzed using FlowJo software, version 9.9.4 (FlowJo LLC).
Urban S.L., Jensen I.J., Shan Q., Pewe L.L., Xue H.H., Badovinac V.P, & Harty J.T. (2020). Peripherally induced brain tissue-resident memory CD8+ T cells mediate protection against CNS infection. Nature immunology, 21(8), 938-949.