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Pgl3 basic firefly luciferase reporter vector

Manufactured by Promega
Sourced in United States

The PGL3-basic firefly luciferase reporter vector is a plasmid that contains the firefly luciferase gene. It is designed for the expression and measurement of firefly luciferase activity in transfected cells.

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17 protocols using pgl3 basic firefly luciferase reporter vector

1

Regulation of MITF-M Promoter Activity

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The mouse MITF-M promoter construct (−1143 to +48, wtCRE) was amplified via PCR using mouse genomic DNA as template, and cloned into the pGL3-basic firefly luciferase reporter vector (Promega, Madison, WI, USA). The mtCRE was constructed by deleting the CRE motif (−153/−146, 5′-TGACGTCA-3′) by using the site-directed mutagenesis kit (Agilent Technologies, Santa Clara, CA, USA). All constructs were verified via DNA sequencing. The cells were seeded in 24-well plates and transfected for 24 h with pGL3-Mitf-M (wtCRE or mtCRE) luciferase reporter, using Lipofectamine® 2000 reagent (Invitrogen, Carlsbad, CA, USA), before treatment with α-MSH and/or PCA for a further 24 h. The cells were harvested and assayed using the Nano-Glo® Dual-Luciferase® Reporter Assay System (Promega, Madison, WI, USA). The pNL1.1 luciferase vector (Promega, Madison, WI, USA) was used as a normalization control.
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2

Cloning and Mutagenesis of CPLCG5 Regulatory Region

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The upstream 1.744 kb regulatory region of CPLCG5 was cloned into a pGL3-basic Firefly luciferase reporter vector (Promega, Madison, WI, USA) to generate CPLCG5-pGL3-basic. The ORF of FTZ-F1 was cloned into pEGFP-N1 (EGFP, enhanced green fluorescent protein) (Solarbio, Beijing, China) to generate FTZ-F1-EGFP. Single mutation of the putative response elements was performed using a QuickMutation™ Kit (Beyotime) using the CPLCG5-pGL3-basic plasmid as a template. Mutation positions of the FTZ-F1 binding site are shown in Fig. 5a.
Drosophila S2 cells were maintained at 28 °C in Drosophila medium (Gibco, Grand Island, NY, USA) supplemented with 10% fetal bovine serum (Gibco). Cell transfections were conducted using the Effectene® Transfection Reagent (Qiagen, Hilden, Germany). Endotoxin-free plasmid DNA (0.2 μg of the constructs and 0.02 μg of pRL-TK) was mixed with 5 μl of Effectene®Transfection Reagent according to the manufacturer’s instructions. After 48 h of transfection, the cells were lysed and subjected to a luciferase assay performed under the Dual Luciferase Reporter Assay System (Promega).
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3

BZW1 Promoter Luciferase Assay

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In the University of California Santa Cruz (UCSC) database (http://genome.ucsc.edu/index.html), we obtained the promoter fragment of BZW1 and cloned the fragment of the BZW1 promoter into the pGL3-basic firefly luciferase reporter vector (E1571, Promega Corporation, Madison, WI, USA) using restriction endonuclease. The reporter vector was transfected into BMDM overexpressing CEBPB using Lipofectamine 2000. After 48 h of incubation, luciferase reporter gene activity was measured using the Dual-Luciferase® Reporter Assay System (E1910, Promega).
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4

Transcriptional Regulation of SpGrx3 by SpHIF-1α

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The ORF sequence of SpHIF-1α (GenBank accession number: KU644140.1) was amplified and inserted into the EcoRI/XhoI sites of pAc5.1-V5 vectors. A series of truncated SpGrx3 promoters containing different numbers of hypoxia response elements (HREs) were generated by PCR and subcloned into the XhoI/HindIII site of the pGL3-Basic firefly luciferase reporter vector (Promega, Madison, Wisconsin). S2 cells were plated in a 24-well plate and transfected with the SpGrx3 promoter activity reporter plasmid, the SpHIF-1α gene expression vector, and the pRL-TK Renilla luciferase plasmid (as internal control). Cells were harvested at 48 h post-transfection and lysed for the examination of firefly and Renilla luciferase activities using a Dual-Luciferase Reporter Assay System (Promega). All experiments were performed in triplicate.
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5

B7-H4 Promoter Luciferase Assay

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Various B7–H4 promoter fragments were synthesized and cloned into the pGL3-basic firefly luciferase reporter vector (Promega, Madison, WI, USA). Briefly, cells were seeded in 24-well plates for 24 h and transfected in triplicates with 0.5 μg of each experimental plasmid and 0.5 μg of the Renilla pRL-TK plasmid (used as a control) per well using Lipofectamine 3000, following the manufacturer's protocol. A dual-luciferase reporter assay (Promega) was performed to measure the relative luciferase activity 24 h after transfection. Relative light units (RLUs) from the firefly luciferase signals were normalized with the RLUs from Renilla luciferase signals.
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6

NRF2-Mediated PIRH2 Promoter Regulation

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The PIRH2 promoter region of a 1295-bp DNA fragment (−948 to +300) containing all three putative AREs for NRF2 (ARE1, −847; ARE2, +77; and ARE3, +324) was cloned into the pGL3-basic firefly luciferase reporter vector (Promega, Madison, WI, USA) at restriction sites Nhe I and Xhol. Primers to amplify the DNA fragment by PCR were 5′ CACGCTAGCGCTGTGTACCCCGAGTATGA 3′ and 5′ GACTCGAGGAGACCACTGTGCAAGCCTA 3′. The PIRH2 promoter region with the same 1295-bp DNA fragment (−948 to +300), except for a mutation on putative ARE3 as indicated, was also cloned into the pGL-3 basic firefly luciferase vector using the same restriction sites. Primers to amplify the DNA fragment by PCR were 5′ CACGCTAGCGCTGTGTACCCCGAGTATGA 3′ and 5′ GACTCGAGGAGACCACTGTGCAATACTAAAATCTTCCCAAGAAGG 3′. The mutation on putative ARE3 was incorporated into the reverse primer as described above. Luciferase reporter assays were performed following the manufacturer’s protocol. Briefly, the reporter vectors or control pGL-3 vector together with a Renilla luciferase vector were cotransfected into NRF2-expressing or control HEK293T cells as indicated. After 24 hours of incubation, the luciferase activity was determined using a Dual Luciferase Assay (Promega). The activity of firefly luciferase reporter was normalized by that of Renilla luciferase of each sample.
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7

Cloning and Characterization of CCL20 Promoter

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Segments of the CCL20 promoter from −862 to +71 (short form) and −3491 to +71 (long form) were PCR-amplified from human genomic DNA extracted from MOLT-4 cells using the following primers (forward primer: 5′-GAGAGTTCTTATACTGCCTTA-3′ and 5′- TTCCTAGTTTGTTGAGTGTT-3′ for the short form and the long form, respectively; common reverse primer: 5′-TGGTTTTTAGCTCAAAGAAC-3′) and cloned into the pGL3-Basic firefly luciferase reporter vector (Promega, Mannheim, Germany) to generate pGL3-862 and pGL3-3491 CCL20 reporter constructs. Reporter constructs containing sequentially truncated fragments (−394, −204, −150, −112, −91 and −50 to +71) of the CCL20 promoter region were generated in a similar manner as described for generating pGL3-862 and pGL3-3491. Mutant reporter constructs containing targeted substitutions in the C/EBP, NF-κB and SP-1 binding sites were generated using the site-directed mutagenesis kit (Stratagene, La Jolla, CA) with the following primers (C/EBP, 5′-GATGACATGATGGGGCCAGGTTATACCTGGGGAAAACCCCATGTGGCAAC-3′; NF-κB, 5′-GGGCCAGTTGATCAATGGGGAAGGGGCCATGTGGCAACACGC-3′; SP-1, 5′-CCATGTGGCAACACGCATTCTGTGTACATTCCC-3′).
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8

Construct pNF-κB-Luc and BmFerHCH Promoter Vectors

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Following Yang et al. [44 (link)], pNF-κB-Luc was generated by inserting the OpIE 2 promoter and five classic NF-κB CREs in tandem between the XhoI and HindIII restriction sites of the pGL3-basic vector. The OpIE 2 promoter was amplified by PCR using the pIZT/V5-His vector as a template. Based on the predicted information, specific primers were used to amplify the sequence (−2025, +16 nt) near the translation initiation site (ATG) of BmFerHCH by PCR. The PCR product was cloned into the pGL3-basic firefly luciferase reporter vector (Promega, Madison, WI, USA) using XhoI and HindIII restriction enzyme sites. The vector was named pGL3(−2025, +16). A series of vectors containing BmFerHCH promoter fragments were constructed using pGL3(−2025, +16) as a template, namely pGL3(−1220, +16), pGL3(−975, +16), pGL3(−540, +16), pGL3(−2025, −1199)-TATA, pGL3(−1220, −939)-TATA and pGL3(−957, −521)-TATA. TATA is the sequence that contains the core promoter region near the BmFerHCH translation initiation site (−243, +16). To construct the mutant vectors pGL3(−540, +16)-MutCRE1, pGL3(−540, +16)-MutCRE2, pGL3 (−540, +16)-MutCRE3 pGL3 (−957, −521)-MutCRE4, we used the Quick Mutation Plus Site Directed Mutagenesis Kit (Beyotime, Shanghai, China). All of the specific primers are shown in Table S3.
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9

Regulation of Tgfbr2 promoter by ZBTB18

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The mouse Tgfbr2 promoter (702 bp, from −650 to +52 relative to the transcription start site) was amplified from genomic DNA of E0771GFP cells by PCR using Q5 Hot Start High-Fidelity 2X Master Mix (NEB). The Tgfbr2 promoter fragment was cloned into the Kpn I and Hind III restriction sites of the pGL3-Basic firefly luciferase reporter vector (Promega). A mutant Tgfbr2 promoter where putative ZBTB18 binding sites (5′-[AC]ACATCTG[GT][AC]-3′) are substituted with two Sma I binding sites (5′-CCCGGGCCCGGG-3′) was generated by cloning a gBlock into the Kpn I and Hind III restriction sites of the pGL3-Basic firefly luciferase reporter vector. 293FT cells were plated in 96-well plates at 104 cells per well. After 24 hours, cells were cotransfected with 75 ng of luciferase reporter plasmid (pGL3-Basic, pGL3-Tgfbr2 promoter, or pGL3-mutant Tgfbr2 promoter); 75 ng of expression plasmid ZBTB18OE, ZBTB18-Nucl, ZBTB18-Cyto, or empty expression vector (EV); and 50 ng of pRL-TK Renilla luciferase vector (to normalize for transfection efficiency; Promega) using TransIT-293 reagent in Opti-MEM I. After 24 hours, luciferase activity was measured using the Dual-Glo Luciferase Assay System (Promega). Firefly luciferase values were normalized to Renilla luciferase values and protein content and reported relative to the EV condition.
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10

Assay for miR-137 Regulation of CDC42

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The wild-type 3′-UTR of cell division control protein 42, CDC42 (CDC42-WT) was amplified from mouse cDNA library, and cloned into a pGL3-basic firefly luciferase reporter vector (Promega, USA) according to manufacturer’s instruction. The putative mmu-miR-137 binding site on CDC42 3′-UTR was mutated using a QuickchangeXL mutagenesis kit (Strategene, USA), then cloned into firefly luciferase reporter vector (CDC42-MU). In HEK293T culture, mouse miR-137 mimic lentivirus (miR-137, SunBio Biotech, China) and its negative control lentivirus (miR-NC) were co-transfected with either CDC42-WT or CDC42-MU luciferase reporter vector. Twenty-four hours after transfection, a Dual Luciferase Reporter Assay System (Promega, USA) was performed according to manufacturer’s instruction. The relative luciferase activities were normalized to the value with CDC42-MU and miR-NC co-transfection.
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