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171 protocols using interleukin 4 (il 4)

1

Monocyte-derived Dendritic Cell Generation

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Human monocytes from nine human leukocyte antigen (HLA) -A2, and two non-HLA-A2 healthy donors were obtained from the NIH Blood Bank. The monocytes were cryopreserved in liquid N2 until use. To generate dendritic cells, the cryopreserved monocytes were thawed, put in tissue culture plate for 4 hrs at 37°C. The non-adherent cells were removed by washing with phosphate buffered saline (PBS). The adherent cells were cultured in complete RPMI 1640 medium (Mediatech, Inc. Manassas, VA) supplemented with human GM-CSF (1000 U/ml, BD Biosciences, San Jose, CA) for two days to generate pre-immature dendritic cells (piDC) or with human GM-CSF (1000 U/ml) and IL-4 (50 ng/ml, BD Biosciences) for 4 days to generate immature dendritic cells (iDC), or with human GM-CSF (1000 U/ml) and IL-4 (50 ng/ml) for 4 days and additional 2 days with TNFα (20 ng/ml, BD Biosciences) and CD40 ligand (200 ng/ml, InvivoGen, San Diego, CA) to generate mature dendritic cells (mDC) (Table 1). Two donors (D1 and D2) were also matured by culturing 2 days with a cytokine cocktail, which contained IL-1β (10 ng/ml, BD Biosciences), IL6 (10 ng/ml, InvivoGen), TNFα (10 ng/ml) and PGE2 (10−7 M, Sigma-Aldrich, St. Louis, MO).
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2

Intracellular Cytokine Analysis and Proliferation of Activated CD4+ T Cells

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At day 3 of cell culture, for intracellular IL-4, IL-5, and IL-13 flow cytometry, cells were stimulated with PMA (10 ng/ml), ionomycin (1 μM) and GolgiStop (2.25 μM Monensin, BD Biosciences) for 4–6 h. The cells were stained with Live/Dead Fixable Blue Dead Cell Stain Kit (Thermo Fisher Scientific), fixed, and permeabilized. The cells were then stained with fluorochrome-labeled antibodies against CD4+ (BioLegend, San Diego, CA), IL-4 (BD Biosciences, San Jose, CA), IL-5 (BD Biosciences), IL-13(Biolegend), Gata3 (Affymetrix, Santa Clara, CA), CD25 (BD Biosciences), and TSLP (Biolegend). 123count™ eBeads (Affymetrix) were added to the cell solution for cell counting purpose. An LSR II flow cytometer (BD Biosciences) was used for flow cytometry and the data were analyzed with FlowJo software (FlowJo, LLC, Ashland OR). For cell proliferation assay, naïve CD4+ T cells were labeled with carboxyfluorescein succinimidyl ester (CFSE, 0.5 μM) before cell activation and treatment. At day 3, DAPI and 123count™ eBeads (Affymetrix) were added to the cell solution for dead cell staining and cell counting purpose by flow cytometry. CFSE intensity of the cultured cells was determined by flow cytometry. Cell division index was calculated with FlowJo software.
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3

Intracellular Th1 and Th2 Cytokines in Pediatric Blood

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Intracellular Th1 and Th2 cytokines were detected in unfrozen pediatric whole blood, collected at ages two, five, and
seven, using flow cytometry. Methods have been described previously and validated for epidemiologic studies (Duramad et al. 2004 (link)). Briefly, 500 μL of whole blood was activated for 4 hours with phorbol
12-myristate 13-acetate (PMA) (Sigma, St. Louis, MO) and ionomycin (Sigma) for CD4+. Cells were stained to detect monoclonal
antibodies specific for IFN-y (Becton Dickinson) or IL-4 (Becton Dickinson) cytokines. Cells that stained positive for IFN-y only
were classified as Th1 cells and the percentage of Th1 cells (Th1%) was defined as the number of Th1 positive cells divided by the
total number of CD4+ cells. A similar procedure was used to detect Th2 cells and define the percentage of Th2 cells (Th2%) by
staining for IL-4 (Becton Dickinson) cytokines. Th1:Th2 cell ratio was defined as Th1% divided by Th2%. Overall, 101 children had
cytokine data for all three time points, with 239 children having data for age two, 231 for age five, and 254 for age seven.
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4

Differentiation of Bone Marrow-Derived Macrophages

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Bone marrow cells were collected from femurs and tibiae of 6‐ to 8‐week‐old C57BL/6 wild‐type (WT) or MSR1/SR‐A knock‐out mice (kindly provided by Siamon Gordon). The cells were treated with red blood cell lysis buffer (155 mM NH4Cl, 12 mM NaHCO3, 0.1 mM EDTA) and plated on tissue culture plastic (Corning Incorporated) for 3 days in DMEM (Gibco) containing 10% FBS, 2 mM glutamine, 100 units/ml penicillin–streptomycin (Gibco) and 20% L929 conditioned supplement. At day 3, the cells in supernatant were transferred to untreated 10‐cm Petri dishes (BD Biosciences) for 7 days for the differentiation into bone marrow‐derived macrophages (BMDMs). Then, BMDMs were treated by either IL‐4 (20 ng/ml, BD Pharmingen) for 48 h to get M2 (IL‐4) macrophages (Appendix Fig S1).
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5

Rhinovirus-Induced Maturation of Monocyte-Derived DCs

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Peripheral blood mononuclear cells (PBMCs) were isolated through Ficoll-Hypaque (Sigma, St Louis, MO) density centrifugation. CD14+ cells were enriched (>95%) from PBMCs using positive magnetic affinity column purification (Miltenyi Biotec, Auburn, CA). Cells were suspended in STEM PRO-34 medium (Invitrogen, Carlsbad, CA) supplemented with GM-CSF (1000 U/ml; BD Pharmingen, San Diego, CA), IL-4 (1000 U/ml; BD Pharmingen), penicillin (10,000 U/ml), streptomycin (10 μg/ml) and 10% autologous serum and maintained at 37° C in 5% CO2. Cells were differentiated for 5 days before analysis, with medium and supplements changed at day 3. RV-induced maturation of monocyte-derived DCs was evaluated after the application of ∼350 TCID50 of RV39. After an additional 48 hrs, cells were collected for surface expression of maturation markers. In addition, supernatants and mRNA transcripts were isolated and analyzed for expression of cytokines relevant to DC maturation status and anti-viral immunity or involved in T lymphocyte development and immune deviation.
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6

Cytokine Analysis in BAL and Serum

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Analysis of cytokine content from unconcentrated BAL and cell supernatants was performed using ELISA kits for TGF-β, IL-5, IL-10, IL-13, IL-17A, IFNγ (R&D Systems, Minneapolis, MN), and IL-4 (BD Biosciences, San Diego, CA). BAL was concentrated using Amicon Ultra centrifugal filters (Millipore, Billerica, MA), and subsequently analyzed for cytokine content using custom Milliplex panels (Millipore) for SAA3, KC, IL-6, MIP-2, G-CSF, GM-CSF, TNF-α, IL-1α, IL-1β, IP-10, TNF-α, IL-12p70, and MCP-1. Serum immunoglobulin ELISAs were performed as previously described (21 (link)).
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7

Cytokine Profiling of DC-T Cell Cocultures

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Culture supernatants of human monocyte-derived DCs were analyzed for IL-12 (p70), IL-10 (BD PharMingen, San Diego, Calif), and IL-6 (R&D Systems, Minneapolis, Minn). Cell supernatants of cocultures of human monocyte-derived DCs with allogeneic CD4+CD45RA+ naive T cells (5 days) were analyzed for IFN-γ, IL-13, IL-4, and IL-10 (BD PharMingen).
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8

Polarized Macrophages Alleviate H9c2 Oxidative Stress

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To evaluate whether polarized macrophages could alleviate oxidative stress injury of H9c2 cells, RAW264.7 cells were cocultured with PBS, LPS (100 ng/mL, Sigma‐Aldrich, USA), or IL‐4 (40 ng/mL, BD, USA) for 24 h on the upper chamber. Then, the upper chamber was moved into the Transwell system (six‐well plate, Corning, New York, NY, USA) for 48 h, where the lower chamber was seeded with H9c2 cells. Next, the H9c2 cells were treated by 100 μmol/L H2O2 for 4 h.
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9

Cytokine and Immune Cell Profiling

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IL-4 (BD555194), IL-10 (DY217b), IFN-γ (DY285), IL-13 (DY213), IL-17 (DY317), IL-22 (DY782), IL-26 (CSB-E11716h), rhIL-26 (R&D), rhIL-23 (R&D), rhIL-2 (R&D), Blocking mouse anti human HLA-Class I (W6/32) and anti-HLA-C (Abcam) both used at 10μg/ml, anti-MHC-II (MS163P1ABX) (Fisher), anti-IL-26 mAb1375, clone 197505 (R&D), CD4 (OKT4) (BD), IL-17PE (BD), IFN-γ- FITC (BD), CD14 FITC (BD) LL-37 (Innovagen). Mouse IgG1 and IgG2b isotype matched antibodies were used as controls.
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10

Cytokine Profiling in Synovial Fluid and Plasma

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Cytokine levels in synovial fluid (n = 13) and plasma (n = 9) was measured using the cytometric bead array (CBA) enhanced sensitivity flex set including nine cytokines (IL-1B, IL-4, IL-6, IL-8, IL-10, IL17A, IL-17F, IFNγ, and TNF, BD Biosciences) according to the manufacturer’s instructions. Plasma and synovial fluid samples were diluted 1:3 in dilution buffer. Samples were analyzed by BD FacsCANTO II. The cytokine concentrations were determined using standards and the FCAP software (BD Biosciences).
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