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11 protocols using hela cells

1

Rhinovirus infection in genetically modified mice

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IL-15Rα−/− mice on a B6.129 background, B6.129 control mice (both purchased from the Jackson Laboratory, USA) and IFNAR1−/− mice on a C57BL/6 background were bred in house under specific pathogen-free conditions. Balb/c and C57BL/6 control mice were purchased from Harlan (Harlan-Sprague-Dawley, UK). Rhinovirus sertotype 1B (RV-1B) obtained from the American Type Culture Collection was grown in HeLa cells (European Collection of Cell Cultures) and purified for in vivo use as previously described 9 (link). The virus was inactivated by exposure to UV light at 1,200mJ/cm2 for 30 min. Mice were lightly anaesthetised with isofluorane and infected intra-nasally (i.n.) with 50 μL of RV-1B (5×106 TCID50) or PBS (mock-infected represented as 0 h in time course studies. All mouse experiments were performed using 6-8 week old mice, and only female mice were used in studies involving wt Balb/c, wt B6.129 and IL-15Rα−/− mice, and males and females were used in studies involving wt C57BL/6 and IFNAR1−/− mice.
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2

Rhinovirus Challenge Protocol for Mice

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Rhinovirus-16 (RV-16) for the human challenge study was obtained from clinical isolates as previously described(11 (link), 44 (link)) and rhinovirus-1B (RV-1B) and -16 (American Type Culture Collection) were grown and titrated in HeLa cells (European Collection of Cell Cultures) by standard methods. For in vivo use in mice, virus was purified as previously described(12 (link)). Virus was inactivated by exposure to UV light at 1,200 mJ/cm2 for 30 min.
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3

HeLa Cell Culture and Queuosine Biosynthesis

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HeLa cells were purchased from the European Collection of Cell Cultures (ECACC), grown in an atmosphere of 5% CO2 at 37°C and routinely maintained in Dulbecco's Modified Eagle's Medium (DMEM) media containing 10% fetal bovine serum (Sigma), 1.5 mM l-glutamine (Gibco), 1% penicillin/streptomycin (Gibco), except for studies evaluating q/Q salvage, where cells were grown in OptiProTM Serum-free media (Gibco) supplemented with 2 mM l-glutamine for three or more passages before experiments. Chemically synthesized q was a gift from Dr. Susumu Nishimura (Tsukuba University, Japan) or purchased from Epitoire (Singapore). Queuosine was purchased from Epitoire (Singapore).
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4

Silybum marianum Seed Extract Preparation

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SM from Silybum marianum seeds was prepared according to Kahol et al. [49 ]. The SM did not contain any solvent residue. The same bioactive flavonolignans were determined as in the standards with the help of a HPLC-MS method [4 (link)]. P60 was obtained from Sigma-Aldrich Buchs (St. Gallen, Switzerland). TC was a kind gift from Gattefossé (Lyon, France). Cremophor A6, A25 was obtained from BASF (Ludwigshafen, Germany). Sucrose esters (SP 50, SP 70, PS 750) were kind gifts from Sisterna (Roosendaalc, The Netherlands). 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), Dulbecco’s Modified Eagle’s Medium (DMEM), Hank’s Balanced Salt Solution (HBSS), phosphate buffered saline (PBS), Trypsin-EDTA, Heat-inactivated fetal bovine serum (FBS), l-glutamine, non-essential amino acids solution, penicillin-streptomycin, were purchased from Sigma-Aldrich). 96-Well cell plates, 12 well cell plates and culturing flasks were obtained from Corning (Corning, New York, NY, USA). Cetostearyl alcohol, stearic acid, propylene glycol, IPM, nipagin M were supplied by Hungaropharma Ltd., (Budapest, Hungary). HeLa cells (human cervical cancer cells) were obtained from the European Collection of Cell Cultures (ECACC, Public Health England, Salisbury, UK). HaCaT cells (human keratinocyte cells) were obtained from Cell Lines Service (CLS, Heidelberg, Germany).
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5

Optimizing Fluorescent Protein Expression

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HeLa cells were purchased from the European Collection of Cell Cultures (UK) and U2OS cells were a gift from Dr Gyula Timinszky (LMU, Munchen, Germany). HeLa and U2OS cells were maintained at 37 °C under 5% CO2 in Dulbecco’s Modified Eagle Medium (DMEM, #E15-009, PAA) supplemented with 10% fetal bovine serum (FBS, #A15-101, PAA), 1% penicillin/streptomycin (P/S, #15140-122, Gibco, Life Technologies) and 1% L-Glutamine (Glu, #25030024, Gibco, Life Technologies). For live cell imaging, cells were seeded on Lab-Tek 4 wells (#055078, Dominique Dutscher) at 60% confluence 24 h before transfection on day 1. On day 2, transfections were carried out using JetPrime reagent (#114-15, Polyplus) according to the manufacturer’s instructions. After 4 h of incubation with the transfection mixture, medium was replaced by 400 μl per well of culture medium composed of FluoroBrite phenol red-free medium (#A18967-01, Life Technologies) containing 0.1% FBS for overnight starvation. For experiment relating to Fig. 2, U2OS cells were transfected with 0.5 μg/well of LSSmOragne-mKate2 plasmid, and 0.25, 0.5, 0.75, and 1 μg/well of the different mTFP1-Yellow plasmids, in order to generate cells with an array of tandem constructs expression levels.
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6

Rhinovirus infection in genetically modified mice

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IL-15Rα−/− mice on a B6.129 background, B6.129 control mice (both purchased from the Jackson Laboratory, USA) and IFNAR1−/− mice on a C57BL/6 background were bred in house under specific pathogen-free conditions. Balb/c and C57BL/6 control mice were purchased from Harlan (Harlan-Sprague-Dawley, UK). Rhinovirus sertotype 1B (RV-1B) obtained from the American Type Culture Collection was grown in HeLa cells (European Collection of Cell Cultures) and purified for in vivo use as previously described 9 (link). The virus was inactivated by exposure to UV light at 1,200mJ/cm2 for 30 min. Mice were lightly anaesthetised with isofluorane and infected intra-nasally (i.n.) with 50 μL of RV-1B (5×106 TCID50) or PBS (mock-infected represented as 0 h in time course studies. All mouse experiments were performed using 6-8 week old mice, and only female mice were used in studies involving wt Balb/c, wt B6.129 and IL-15Rα−/− mice, and males and females were used in studies involving wt C57BL/6 and IFNAR1−/− mice.
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7

HeLa Cell Culture Protocol

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HeLa cells obtained from the European Collection of Cell Cultures (ECACC; Sigma-Aldrich) were maintained in Dulbecco’s Modified Eagle Medium (DMEM) with L-glutamine and glucose, 10% fetal calf serum, in a humidified incubator (LEEC Ltd, UK) at 37 °C and 5% CO2.
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8

Culturing HeLa Cells in Media

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Human epithelial carcinoma (HeLa) cells were obtained from the European Collection of Cell Cultures (Salisbury, UK) and maintained in DMEM supplemented with GlutaMAX I and 10% fetal bovine serum (FBS, Invitrogen), 10% charcoal stripped FBS (CSS, Gibco), or lipoprotein deficient FBS (LDS, Sigma) in a humidified atmosphere of 5% CO2 at 37 °C.
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9

HeLa Cell Culturing Protocol

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Human cervix carcinoma HeLa cells were obtained from the European Collection of Cell Cultures (ECACC). The cells were maintained in Dulbecco’s Modified Eagle’s Medium (DMEM, Sigma-Aldrich, Budapest, Hungary), supplemented with 10% fetal bovine serum (Biowest, Nuaillé France), 4 mM L-glutamine (Sigma-Aldrich, Hungary), 100 U/mL penicillin, 100 µg/mL streptomycin solution (Sigma-Aldrich, Budapest, Hungary) and 0.25 µg/mL amphotericin B (Sigma-Aldrich, Budapest , Hungary) in a humidified atmosphere containing 5% CO2 at 37 °C. On reaching 80% confluence, cells were detached every 2–4 days using 0.05% (w/v) trypsin, 0.02% (w/v) EDTA solution and not used beyond passage 20.
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10

Rhinovirus Cytopathic Effect Quantification

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Supernatants from RV16-infected HBECs were collected 24 h post infection and 1:2 serial diluted in DMEM with Glutamax containing 2% FBS, 1% penicillin-streptomycin, 1% non-essential amino acids and 1% sodium pyruvate (Life Technologies, Carlsbad, CA, USA). Dilutions were added to 80% confluent Ohio HeLa cells (European Collection of Cell Cultures) in 96-well plates (Nunc Technologies, Carlsbad, CA, USA) in duplicates. Plates were rocked for 1 h at room temperature and then incubated for 4 days at 37 °C, 5% CO2. Then the cell monolayer was fixed and stained with crystal violet. Cytopathic effects were assessed by spectrophotometry and TCID50 was calculated with the Spearman-Kärber algorithm.
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