The largest database of trusted experimental protocols

2 protocols using clean up mini kit

1

Microbial DNA Extraction and Amplification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chromosomal DNA was extracted using the Genomic Mini Kit (A&A Biotechnology, Gdynia, Poland), according to the manufacturer’s instructions. The amplification of the bacterial 16S rRNA gene was performed with the universal primer pair 27f and 1492r (25 ). In the identification of yeast strains, fragments of approximately 500–600 bp, corresponding in size to the ITS1, ITS2 region and the 5.8 ribosomal RNA gene, were amplified with the primer set ITS1 and ITS4 (44 ).
All PCR reactions were conducted using the MJ Mini Gradient Thermal Cycler (Bio-Rad, Hercules, CA, USA) in a mixture containing 40 pmol of each primer, 1.5 U of RedTaq ReadyMix DNA polymerase (Sigma-Aldrich, St. Louis, MO, USA), and 20 ng of template DNA diluted to 50 μL with DNase-free water. PCR products were detected by electrophoresis in 1% agarose gel (w/v) in 0.5×TBE buffer (Sigma-Aldrich, St. Louis, MO, USA) and purified using the Clean-Up Mini Kit (A&A Biotechnology, Gdynia, Poland) following the manufacturer’s protocol.
+ Open protocol
+ Expand
2

Antioxidant and Microbial Analyses Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
2-2-Diphenyl-1-picrylhydrazyl (DPPH); Folin-Ciocalteu’s reagent (2 N); (±)-6-hydroxy-2,5,7,8-tetramethylchromane-2-carboxylic acid (Trolox); (+)-catechin; and 2,4,6-tri(2-pyridyl)-s-triazine (TPTZ), linoleic acid, Tween 40, iron (II) sulfate heptahydrate, iron (III) chloride hexahydrate, β-carotene, RedTaq ReadyMix DNA polymerase, agarose gel electrophoresis and TBE buffer were purchased from Sigma-Aldrich (St. Louis, Missouri, USA). Plate count agar (PCA), DG18 medium, and bullion agar were purchased from Merck (Darmstadt, Germany). The oxidase test kit was obtained from Merck (Darmstadt, Germany). API Tests were purchased from BioMérieux (France). Genomic Mini kit and Clean Up Mini Kit were purchased from A&A Biotechnology (Gdynia, Poland). MJ Mini Gradient Thermal Cycler was obtained from Bio-Rad, (Hercules, CA, USA). BigDye Terminator Ready Reaction Cycle Sequencing kit was purchased from Applied Biosystems (Foster City, CA, USA). Unless indicated otherwise, all chemicals were purchased from Avantor Performance Materials Poland S.A. (Gliwice, Poland).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!