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5 protocols using polyclonal anti caspase 3 antibody

1

Caspase-3 Activation Detected by Western Blot

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Western blot analysis was used to directly demonstrate capase-3 processing. Briefly, protein extracts and sample preparation were done as described previously [46 (link)]. Caspase-3 processing was determined using Western blot analysis with a polyclonal anti-caspase-3 antibody (1:1000; Cell Signaling Technology, Danvers, MA, USA) recognizing both pro- and active protease forms and polyclonal anti-HSP90 antibody (1:2000; Cell Signaling Technology, Danvers, MA, USA) for detection of reference protein. A horseradish peroxidase-conjugated secondary anti-rabbit antibody (1:2000; Dako, Glostrup, Denmark) in combination with an enhanced chemiluminiscence (ECL; Amersham, Little Chalfont, UK) was used for signal detection.
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2

Apoptosis Pathway Protein Analysis

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All chemicals were of analytical grade and purchased from AppliChem (Darmstadt, Germany), Carl Roth (Karlsruhe, Germany), Merck (Darmstadt, Germany) or Sigma-Aldrich (Taufkirchen, Germany). RL2 was purified as described previously [6 (link)] and applied to cells in 137 mM NaCl. Z-VAD-FMK (N-1510, Bachem, Bubendorf, Switzerland) and recombinant TRAIL (KillerTRAIL, Enzo Life Sciences, Farmingdale, NY, USA) were applied to cells in indicated concentrations. The following antibodies were used for Western Blot analysis: polyclonal anti-AIF antibody (#5318), polyclonal anti-BID antibody (#2002), polyclonal anti-caspase-3 antibody (#9662), polyclonal anti-PARP antibody (#9542), and polyclonal anti-SOD2 antibody (#13194) from Cell Signaling Technology, Danvers, MA, USA); polyclonal anti-actin antibody (A2103, Sigma-Aldrich, St Louis, MO, USA); polyclonal anti-κ-Casein antibody (#ab111406, Abcam, Cambridge, United Kingdom); monoclonal anti-TOMM70A antibody (sc-390545n Santa Cruz Biotechnology, Dallas, TX, USA); and monoclonal anti-caspase-8 antibody (kindly provided by Prof. P. H. Krammer, DKFZ, Heidelberg, Germany). Horseradish peroxidase-conjugated goat anti-mouse IgG1, IgG2b, goat anti-rabbit and rabbit anti-goat were from Santa Cruz (CA, USA).
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3

Western Blot Antibody Protocols

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The following antibodies were used for Western Blot analysis: polyclonal anti-caspase-3 antibody (#9662) and monoclonal anti-RIPK1 XP antibody (#3493) from Cell Signaling; polyclonal anti-actin antibody (A2103; Sigma-Aldrich, Germany), polyclonal anti-mCherry antibody (ab183628; Abcam), monoclonal anti-caspase-10 antibody (M059–3; MBL International), monoclonal anti-FADD antibody (clone 1C4), monoclonal anti-caspase-8 antibody (clone C15) and monoclonal c-FLIP antibody (clone NF6). Horseradish peroxidase-conjugated goat anti-mouse IgG1,-2a,-2b, goat anti-rabbit and rabbit anti-goat were from Santa Cruz (California, USA). All chemicals were of analytical grade and purchased from Merck (Darmstadt, Germany) or Sigma-Aldrich (Germany). The C15, NF6 and 1C4 antibodies were kindly provided by Prof. P. H. Krammer (DKFZ, Heidelberg). Recombinant LZ-CD95L was produced as described [25 (link)].
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4

Western Blot Analysis of Apoptosis Markers

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Cells were lysed for 30 min on ice in 10 mM Tris-HCl (pH 8.0), 150 mM NaCl, 5 mM EDTA, 1% Triton X-100, and 0.1% sodium dodecyl sulfate (SDS) supplemented with a protease inhibitor cocktail (Roche Diagnostics, Basel, Switzerland). Lysates were mixed with SDS-PAGE sample buffer and boiled for 5 min. Protein concentrations were determined with a BCA protein assay kit (Pierce, Rockford, IL) using bovine serum albumin as a standard. Equal amounts of total protein were examined by Western blot. The following antibodies were used: anti-Flag MAb (M2) and anti-βnactin MAb (Sigma-Aldrich), anti-cleaved caspase-3 (Asp175) polyclonal antibody, anti-caspase-3 polyclonal antibody (Cell Signaling Technology, Beverly, MA), anti-GFP MAb (MBL, Nagoya, Japan), horseradish-peroxidase (HRP)-conjugated goat anti-mouse IgG (Amersham Bioscience, Uppsala, Sweden), and HRP-conjugated goat anti-rabbit IgG (Amersham Bioscience). Signals were visualized after the treatment of the membrane with SuperSignal West Pico chemiluminescent substrate (Pierce).
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5

Western Blot Analysis of Cardiac Proteins

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Western blot analysis of total protein isolated from NRCMs was performed as previously described 13. Briefly, protein samples (30 or 50 μg) were separated in 10% and 15% SDS‐PAGE and blotted to PVDF membrane. The membranes were incubated with the primary antibodies including rabbit anti‐SCAD monoclonal antibody (diluted 1:1000; Abcam, Cambridge, UK), anti‐Caspase‐3 polyclonal antibody (diluted 1:1000; Cell Signaling Technology, Danvers, MA, USA), Bcl‐2 polyclonal antibody (diluted 1:1000; Cell Signaling Technology, Danvers, MA, USA), Bax polyclonal antibody (diluted 1:1000; Cell Signaling Technology, Danvers, MA, USA), AMPK monoclonal antibody (diluted 1:1000; Cell Signaling Technology, Danvers, MA, USA), p‐AMPK monoclonal antibody (diluted 1:1000; Cell Signaling Technology, Danvers, MA, USA) and mouse anti‐PPARα monoclonal antibody (diluted 1:500; Sigma‐Aldrich, St.Louis, MO, USA), anti‐α‐tubulin monoclonal antibody (diluted 1:5000; Sigma‐Aldrich, St.Louis, MO, USA), and then the HRP conjugated goat‐antimouse or rabbit IgG1 secondary antibody (1:10,000; Sigma‐Aldrich, St.Louis, MO, USA) were used. Finally, the protein expression levels were detected with chemiluminescent substrate (Thermo, Waltham, MA, USA). Results were analysed with the Image J system.
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