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5 protocols using ab54481

1

Detailed Western Blot Protocol for Mitochondrial Protein Analysis

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In this study, the western blot assay was performed as our previously described [34 (link), 35 (link)]. Briefly, the protein sample (20 µg/lane) was separated using 8% or 12% SDS-PAGE gel and then transferred to nitrocellulose membranes. The membrane was blocked using 5% bovine serum albumin, then incubated with primary antibodies overnight at 4 ˚C. In the present study, the primary antibodies used were: anti-COX7A1 (1:3000; Abcam, ab123591, USA), anti-p62 (1:3000; Abcam, ab56316, USA), anti-LC3 (1:3000; Sigma, L7543, USA), anti-TMO20 (1:1000; Santa Crus, sc-17764, USA), anti-TIM23 (1:2000; Abcam, ab230253, USA), anti-DRP1 (1:2000; Abcam, ab184247, USA), anti-MFN1 (1:1000; Proteintech, 13798-1-AP, USA), anti-VDAC (1:2000; Proteintech, 10866-1-AP, USA), anti-PINK (1:2000; Abcam, ab137361, USA), anti-PARKIN (1:2000; Abcam, ab77924, USA), anti-PGC-1α (1:3000; Abcam, ab54481, USA), anti-TFAM (1:1000; Cell Signaling, 7495, USA) and anti-GAPDH (1:3000; Santa Cruz, sc-47724, USA). After incubated with HRP-labeled secondary antibodies, the protein bands were visualized using an enhanced chemiluminescence kit (SuperSignal West Femto Maximum Sensitivity Substrate, Thermo Fisher Scientific, USA) as well as ChemiDoc Imagers (Bio-Rad Laboratories, USA). Full-length western blots can be found in Supplemental Materials.
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2

Quantifying Mitochondrial Proteins in Quadriceps

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Quadriceps muscle was homogenised in radioimmunoprecipitation assay (RIPA) buffer, separated by SDS-PAGE and immunoblot analysis conducted as previously described [22 ,28 (link)]. Stain-free images were collected after transfer for loading control (ChemiDoc MP and ImageLab software version 4.1; Bio-Rad Laboratories, New South Wales, Australia). Membranes were probed with antibodies raised against PGC1α (cat: ab54481, Cell Signalling, USA) and total OXPHOS (cat: ab110413, Abcam, UK).
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3

Western Blot Analysis of Apoptosis and Metabolism Regulators

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Cells were lysed by lysis buffer (10 mM Tris, 1 m MEDTA,1% Triton X-100, 1 mM Na3VO4, 20 μg/mL aprotinin, 20 μg/mL leupeptin, 1 mM dithiothreitol, and 50 μg/mL phenylmethylsulfonyl fluoride). Cell lysates were subjected to 10% SDS-PAGE and proteins were transferred to the PVDF membrane by an electro-transfer unit. Membranes were probed with primary antibodies overnight at 4  °C. The primary antibodies included anti-Bcl-2 (ab692, Abcam; 1:2000), anti-caspase-3 (ab32351; 1:2000), anti-Bax (#89477, cell signaling technology, Beverly, MA, USA; 1:2000), anti-PGC1-α (ab54481; 1:2000), anti-NRF1 (ab34682; 1:2000), anti-PKC (ab181558; 1:2000), anti-HMGB1 (ab18256; 1:2000), anti-RAGE (ab216329; 1:2000), and anti-NFκB (ab16502; 1:2000). Following incubation of primary antibodies, the membranes were rinsed three times and incubated with corresponding secondary antibodies. The immunoreactive bands were developed using a Western-Ready™ ECL Substrate Plus Kit (426316, BioLegend, San Diego, CA, USA) and detected by MultiGel-21® image system. β-actin was used as an internal control.
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Western Blotting of Lipid Regulators

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Western blotting was performed as described previously (Cui, et al. 2012 (link)). Antibodies against hormone-sensitive lipase (HSL, Cell Signaling Technology, 4107S), peroxisome proliferator-activated receptor (PPAR)-α, (Abcam, ab8934), PPAR gamma coactivator (PGC)1α (Abcam, ab54481), RGC-32, and α-tubulin (Cell Signaling Technology, 9099S) were used. All the antibodies were applied at 1:1000 dilution. Protein expressions were detected using an enhanced chemiluminescence kit (Millipore).
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5

Western Blot Analysis of Muscle Proteins

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Freshly frozen quadriceps muscle was pulverized in liquid nitrogen. About 50mg of muscle powder was weighed and proteins extracted with the ProPrep protein extraction solution (Bulldog Bio, 17081). Protein concentration was measured with the Pierce BCA protein assay kit (Thermo Fisher, 23225). 20μg of total proteins was loaded onto 4–12% gradient NuPAGE Bis-Tris gels (Invitrogen) and run for 1.5 hours at 120V. Proteins were transferred to nitrocellulose membranes (Biorad). After one-hour blocking in 5% milk PBST (0.1% Tween 20) solution, membranes were incubated overnight at 4°C with in-house developed guinea pig anti-PPARδ and commercial PGC1α (Abcam ab54481), Tom20 (Cell Signaling 42406), and HSP90 (Cell Signaling 4877) antibodies, followed by 3x 5-minute washes in PBST, 1-hour incubation in secondary HRP antibodies, and 3x 5-minute washes in PBST. SuperSignal West Pico (Thermo 34080) was used to develop the signals.
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