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17 protocols using ab150165

1

Flow Cytometry Analysis of ADC and Mesothelin

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EMT6 and CT26 cell lines were stained for surface ADC binding using 1 µg/mL of mesoADC or isotype ADC or surface mesothelin expression with 10 µg/mL antimesothelin antibody (AM26533AF-N, Origene) or rat IgGa isotype control (559073, BD Pharmingen) followed by 2 µg/mL goat antimouse IgG Alexa Fluor 647 (421236, Life Technologies) or 4 µg/mL goat antirat IgG Alexa Fluor 488 (ab150165, Abcam). To detect intracellular GSDME expression, cells were fixed in 10% neutral buffered formalin (Sigma) then permeabilized with ice-cold methanol. Cells were stained with 1 µg/mL anti-GSDME antibody (ab215191, Abcam) or rabbit IgG isotype control (02–6102, Invitrogen) followed by 2 µg/mL goat antirabbit Alexa Fluor 647 (A32733, Life Technologies). Data acquisition was performed using a BD Accuri C6 Plus flow cytometer (BD Biosciences), and data analysis was performed using FCS Express software (De Novo Software).
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2

Protein Expression and Visualization

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According to the manufacturer’s instructions, all proteins were collected using a RIPA buffer (Sigma, USA) and separated using SDS-PAGE (Bio-Rad, USA). The proteins were then transferred onto a PVDF membrane (Millipore, USA), and 5% fat-free milk was used to block the membrane. Incubation with the primary antibody happened overnight, followed by incubation with the respective secondary antibody (two hours). The results were visualised using an enhanced ECL system (Tanon, China). The antibodies used, with respective dilutions, were RAD23B (Abcam, ab194273, 1:1000), KLF2 (Abcam, ab203591, 1:1000), IgG (Abcam, ab150165, 1:500), and GAPDH (Abcam, ab8245, 1:5000).
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3

Immunofluorescence Analysis of Lung Macrophages

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Lung tissues, aseptically isolated on day 3 p.i., were fixed in 4% paraformaldehyde (PFA) (Shanghai Life iLab Biotech) for 24 h at 4 °C. Subsequently, the tissues were subjected to gradient dehydration using 15% and 30% sucrose solutions for another 24 h before being embedded in Tissue-Tek O.C.T. Compound (SAKURA, Baltimore, MD, USA) and sectioned into cryosections with a thickness of 8 μm. The lung sections were blocked with 10% goat serum for 1 h at room temperature and incubated with anti-F4/80 antibody (1:150 dilution, ab16911, abcam, Cambridge, England) overnight at 4 °C. Next, they were rewarmed for 1 h before being incubated with Goat Anti-Rat IgG H&L (Alexa Fluor 488) preadsorbed secondary antibody (1:300 dilution, ab150165, abcam) for 1 h at room temperature in the dark. This was followed by washing five times using PBS. Then, AutoFluoQuencher (APPLYGEN, Beijing, China) was added and incubated for 15 min. Slides were then sealed by adding DAPI Fluoromount-G (SouthernBiotech, UAB, Birmingham, AL, USA), and images were acquired using a fluorescent microscope (200×).
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4

Immunohistochemical Analysis of Foxp3, ZO-1, and Occludin

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Additional sections were incubated with primary antibodies against forkhead box P3 (Foxp3) (mouse immunoglobin G [IgG], CatLog: sc-166212, Santa Cruz, California, USA), ZO-1: Zona Occludens 1 (ZO-1) (rat IgG, CatLog: sc-33725, Santa Cruz), and occludin (mouse IgG, CatLog: sc-133256, Santa Cruz), respectively, in phosphate-buffered saline (PBS) with 1% fetal calf serum (FCS) overnight at 4°. Next, the sections were washed and intubated with goat-anti-mouse (goat IgG, Catlog: ab150113, Abcam, Cambridge, UK) or goat-anti-rat secondary antibodies (goat IgG, Catlog: ab150165, Abcam) for 60 min. Images were obtained under a confocal microscope (Olympus).
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5

Western Blot Analysis of Protein Expression

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Total proteins were extracted from rPAECs with different treatments by using RIPA regents (Beyotime). After quantification by the BCA kit (Beyotime), the equal amounts of proteins were separated by 10% SDS-PAGE and subsequently moved onto the PVDF membrane (Millipore, USA). Next, the membrane was blocked utilizing nonfat milk (5%) for 1 h. The primary antibodies against METTL3 (ab195352, Abcam, Cambridge, MA, USA), TRPC6 (PA5-95049, Invitrogen), CD31 (PA5-32321, Invitrogen), VE-cadherin (ab231227, Abcam), α-SMA (14-9760-82, Invitrogen), vimentin (ab92547, Abcam), NFATc1 (MA5-32686, Invitrogen), NFATc2 (MA5-32661, Invitrogen), NFATc3 (PA5-79734, Invitrogen), NFATc4 (PA5-105650, Invitrogen), and GAPDH (ab8245, Abcam) were incubated with the membrane at 4°C. On the next day, the secondary antibody (ab150165, Abcam) was added to the membrane for another 2 h. Afterwards, the protein bands were developed by using the ECL kit (Thermo Fisher Scientific, Waltham, MA, USA). Finally, the intensity of the bands was measured using ImageJ software.
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6

Immunofluorescence Analysis of M1 Macrophages

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BMMs and M1-BMMs were seeded into 24-well plates, respectively, washed with PBS, and fixed in 4% paraformaldehyde (Beyotime Biotechnology Co., Ltd., Shanghai, China). Next, the cells were permeated with 0.2% Triton X-100 in PBS, blocked with 10% goat serum (Beyotime), and incubated with primary antibodies F4/80 (ab6640, Abcam) and iNOS (ab178945, Abcam) overnight. After that, the cells underwent 1-h incubation with Alexa Fluor® 488-conjugated goat anti-rat antibody (ab150165, Abcam) or Alexa Fluor® 647-conjugated goat anti-rabbit antibody (ab150079, Abcam). Finally, the cells were incubated with 4′,6-diamidino-2-phenylindole (DAPI), followed by 3 washes with PBS.
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7

Immunohistochemistry of Frozen Tissue Sections

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The fixed vascular tissues were dissected and frozen in OCT compound. The crystal tissue sections (10 μm) were cultured with 0.3% Tween-100 for 30 min and blocked with 5% donkey serum for 1 h at room temperature. Similarly, the coating coverslips (WHB-12-CS, WHB Scientific, China) on which cells were plated were fixed and treated as described above. These samples were incubated overnight at 4°C with primary antibodies against Axl (13196, Proteintech), CD86 (14-0862-82, Invitrogen, USA), pSTAT1 (9167, Abcam) and F4/80 (71299, CST). After being washed with PBS, the slides were exposed to the indicated fluorophore-labeled secondary antibodies (ab150075, ab150165, Abcam, USA) at room temperature for 2 hours and nuclear-stained 4′,6-diamidino-2-phenylindole (DAPI) (C1002, Beyotime, China). The fluorescent signals were examined and photo imaged under a laser scanning confocal microscope (LSM800, Zeiss, Germany).
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8

Quantifying Macrophage Infiltration in Aortic Tissue

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Macrophage infiltration was analysed by detecting macrophage markers F4/80 using the IF assay. The paraffin sections of aortic root were dewaxed and rehydrated. After blocking using PBST with 1% BSA at room temperature for 30 min, the sections were incubated with anti-F4/80 (ab6640, 1:100, Abcam) overnight at 4 °C and incubated with Goat Anti-Rat IgG H&L (Alexa Fluor® 488) (ab150165, 1:1000, Abcam) for 1 h at room temperature. The nuclei were stained using DAPI. The results were observed under a fluorescence microscope (Olympus, Japan).
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9

Quantification of Adipose Tissue Macrophages

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The sections of mouse adipose tissue were boiled for 10 min in sodium citrate buffer to retrieve antigens. After blocking in 2% BSA and treatment with 0.1% Triton X100, the sections were incubated with F4/80 antibody (1:500, ab6640, Abcam) overnight at 4°C. Subsequently, the sections were probed with Alexa488-conjugated secondary antibody (1:200, ab150165, Abcam), followed by counterstaining with DAPI. Under a fluorescence microscope, the sections were examined and photographed. The percentage of F4/80-positive cells was quantified using Image J software.
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10

Immunohistochemical Analysis of Skin Tissue

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The tissues of skin surrounding samples were harvested at 7 days post-surgery. After fixed and cut into 5 μm thickness sections, the tissue were stained with hematoxylin-eosin (H&E), Masson and immunohistochemistry. The procedures of immunofluorescence staining was put as follows: After blocked with 1% BSA for 30min, the tissue sections were incubated with primary antibody against CCR7 (1:50, ab52602, AbCam) and CD206 (1:50, ab64693, AbCam) at 4 °C overnight. Then, the tissue was incubated with goat anti-rat Alexa Fluor 488 (1:200, ab150165, AbCam), goat anti-rabbit Alexa Fluor 594 (1:200, ab150080, AbCam) secondary antibodies and DAPI. The samples were observed by fluorescent microscope (Leica, TCS SP8 SR). Image-Pro Plus software was used to quantitatively analyze the thickness of fibrous layer and the percentage of CCR7-positive (M1) or CD206-positive (M2) cells.
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