The largest database of trusted experimental protocols

8 protocols using bibf1120

1

Evaluating Combination Therapies on Ovarian Cancer Xenografts

Check if the same lab product or an alternative is used in the 5 most similar protocols
All animal work adhered to the Agency for Science, Technology and Research (A*STAR; Singapore), Institutional Animal Care and Use Committee (IACUC) guidelines on the use and handling of animals. SKOV3-Luc-D3 cells (Xenogen Co., Alameda, CA, USA) at a density of 3.5×106 in 100 μl of PBS were injected into the intraperitoneal cavity of 4-week-old female BALB/c nude mice. At 6 weeks post-implantation, the mice were randomly divided into control and treatment groups (n = 5 animals per group). For the treatment group, mice were administered via oral gavage with 50 mg/kg AZD0530, 50 mg/kg BIBF1120, or 25 mg/kg AZD0530 plus 25 mg/kg BIBF1120 (Selleck Chemicals, Houston, TX) for 5 days a week for 2 weeks. The drug was re-suspended in 0.5% hydroxypropyl methycellulose (Sigma-Aldrich) and 0.1% polysorbate buffer (Sigma-Aldrich). The control group received the vehicle buffer alone. The growth of tumor xenografts was monitored by bioluminescence using the IVIS system 2000 series (Xenogen Co.). The xenografts were harvested at 8 weeks post-implantation for gene expression microarray analysis (Affymetrix GeneChip Human Gene 1.0ST Array, Santa Clara, CA, USA) to ascertain the EMT scores, and then subjected to paraffin embedding followed by immunohistochemical staining for E-cadherin (#3195S, Cell Signaling Technology, Beverly, MA).
+ Open protocol
+ Expand
2

Modulation of Mesenchymal Progenitor Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Further six bone marrow samples (4M/2F median age 68) were processed, as described above, to obtain MPC culture in BIOW2 sera batch with or without adding 4 nM of Erlotinib-HCl (OSI-744, SelleckChem, Houston, USA-TX), a potent EGFR inhibitor, and 100 nM of Nintedanib (BIBF 1120, SelleckChem) to simultaneously inhibit VEGF, FGF, and PDGF receptors. Cell cultures were performed in duplicate in six-well culture plates for suspension cultures, media were changed after 48 and 72 h restoring inhibitors concentration and at day 6 cultures were detached for flow cytometry analysis to quantify mesenchymal CD73+CD90+ population. Similarly and in parallel, MPC cultures were performed applying LZM sera batch in presence or absence of 50 nM of Linsitinib (OSI-906, SelleckChem) as IGF-1R inhibitor. Significant differences were revealed by one-way ANOVA test, and the inhibition index was calculated as difference in CD73+CD90+ percentages in treated and no-treated cultures divided by the percentage in the non-treated. Data were collected in duplicate and reported as median values ± standard error (SE).
+ Open protocol
+ Expand
3

Fibroblast-Based TGF-Beta Signaling Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse embryonic fibroblasts (MEFs) were previously stably transfected with the wild‐type β6 subunit (MEF‐β6) by this group (Xu et al. 2009). Cells were maintained in Dulbecco's Modified Eagle Medium (DMEM), 4 mmol/L l‐Glutamine, 10% foetal calf serum (FCS) containing 5 μg mL−1 Blastocidin (InVivoGen, San Diego, CA). The transformed mink lung reporter cells (TMLC) stably expressing firefly luciferase under the control of a TGF‐β‐sensitive portion of the plasminogen activator inhibitor‐1 (PAI‐1) promoter (Abe et al. 1994), were a gift from Dan Rifkin (New York University, New York), and were cultured in DMEM, 4 mmol/L l‐Glutamine, 10% FCS, and 250 μg mL−1 G‐418 sulphate (Sigma, Dorset, UK).
The antibodies used were mouse monoclonal anti αVβ6 ‐clone 10D5, (Millipore, Billerica, MA), F(ab')2 fragment of goat anti‐mouse IgG conjugated to R‐phycoerythrin (Life Technologies, Paisley, UK), and mouse monoclonal anti‐TGF‐β1, β2, β3 –clone 1D11 (R&D systems, Abingdon, UK).
The Alk5 inhibitor (SB525334A) was obtained from GSK (Stevenage, UK). Pirfenidone, NAC, and dexamethasone were purchased from Sigma (Dorset, UK) and BIBF1120 purchased from Selleckchem (Munich, Germany). TGF‐β1 was obtained from (R&D systems).
+ Open protocol
+ Expand
4

Inhibitors of TLR-4 and FGFR1 Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
TAK242 (the inhibitor of TLR-4) and BIBF1120 (the inhibitor of FGFR1) were purchased from Selleckchem (Houston, USA). bFGF, LY294002 were purchased from Sigma-Aldrich (St. Louis, MO, USA). All the compounds were dissolved at 10 mM in DMSO and stored at -20°C. LPS were purchased from Sigma-Aldrich (St.Louis, MO, USA) and dissolved in PBS as stock solution and the aliquots were stored at -20°C.
+ Open protocol
+ Expand
5

Effects of BIBF1120 on CCl4-Induced Liver Injury

Check if the same lab product or an alternative is used in the 5 most similar protocols
To study the effect of BIBF1120, male C57BL/6 mice were treated with a single intraperitoneal injection of olive-oil or CCl4 (1 ml/kg in olive-oil) at day 1. At day 2 and day 3, CCl4-treated mice received intra-peritoneal administration of 5 mg/kg tyrosine kinase inhibitor BIBF1120 (Selleckchem, Boston, NY) prepared in 1% DMSO (Sigma) and 5% β-hydroxycyclodextrin (Sigma) or vehicle treatment (1%DMSO/5%β-hydroxycyclodextrin/PBS) (n = 5 per group). At day 4, all mice were sacrificed and livers were harvested for the subsequent analysis. Alanine Transaminase (ALT) levels in the plasma was measured using ALT Colorimetric Activity Assay Kit (Cayman Chemical Company, Michigan, MI, USA) as per manufacturer’s instructions.
+ Open protocol
+ Expand
6

Anticancer Compounds Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Erlotinib was kindly provided by F. Hoffman-La Roche Ltd, gefitinib was provided by AstraZeneca Inc; VS-4718 was provided by Verastem Inc; afatinib, osimertinib, lapatinib, AZD4547, and BIBF1120 were purchased from Selleck Chemicals; SU11274 and picropodophyllin were from Carbiochem; dasatinib was from Bio Vision; SB203580 was from Cayman Chemical; sorafenib was acquired from Toronto Research Chemicals Inc, cisplatin was from Bristol-Myers Squibb Company; and PD173074 was from Sigma-Aldrich.
Anti-HER2 and anti-pHER2 antibodies were purchased from Merck Millipore Corporation, anti-EGFR, anti-pEGFR, anti-pHER3, anti-HER4, anti-pHER4, anti-pc-Met, anti-IGF1Rβ, anti-pIGF1Rβ, anti-PDGFRβ, anti-pPDGFRβ, anti-FGFR1, anti-pFGFR, anti-ERK1/2, anti-pERK1/2, anti-AKT, anti-pAKT, anti-STAT3, anti-pSTAT3, anti-PTEN, anti-SRC, anti-FYN, anti-LYN, anti-YES, anti-LCK, anti-pSRC family (Y416), anti-pSRC (Y527), anti-FAK, anti-pFAK (Y397), anti-pFAK (Y576/577), anti-pFAK (Y925) and anti- EGFR (del E746-A750) antibody were from Cell Signaling Technology, anti-HER3 and anti-c-Met were from Santa Cruz Biotechnology Inc, anti-β-actin was from Abcam, Inc., and anti-α-tubulin was from Sigma-Aldrich.
+ Open protocol
+ Expand
7

Toxicology Evaluation of PHMG and NDN

Check if the same lab product or an alternative is used in the 5 most similar protocols
The PHMG solution (25%) we used was a generous gift from SK Chemicals (Seongnam, Korea). NDN (i.e., BIBF 1120) was purchased from Selleck Chemicals Co. Ltd. (Houston, TX, USA) with purity > 99%. Mice in the PHMG group received a single intratracheal instillation of 1.1 mg/kg, in 50 μL saline solution using an automatic video instillator [58 (link)]. Mice in the VC group were instilled with saline through the same route. NDN was suspended in a 0.5% sodium carboxymethylcellulose (CMC, Sigma-Aldrich, Saint Louis, MO, USA) solution and was gavaged to mice once daily for a period of 21 days at 60 mg/kg/day. The daily application volume of NDN was calculated in advance based on the most recently recorded body weight of the individual animal. Mice in the VC and PHMG groups received 0.5% CMC instead of NDN via the same route.
+ Open protocol
+ Expand
8

Induction of CD8+ T Cell Differentiation

Check if the same lab product or an alternative is used in the 5 most similar protocols
For CD8+ T cell differentiation experiment, naive CD8+ T cells were sorted from fresh spleen tissue by magnetic beads (BD, 551516) and stimulated with DynabeadsTM Mouse T‐activator CD3/CD28 (Thermo Fisher, 11542D; at a ratio of 1:1) for 6 days for further experiment in vitro. The induction conditions of CD8+ T cells were RMPI 1640 containing IL‐2 (25 ng/ml). The concentration of lenvatinib (Selleck S1164) and ISCK03 were 10 μM (Selleck S2070). The concentration of rapamycin was 20 nM (Selleck S1039). The concentration of BIBF1120 was 2 μM (Selleck S1010). The concentration of BLU667 was 5 μM (Selleck S8716).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!