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5 protocols using knockout sr xenofree cts

1

Xeno-free Culture of Human iPSCs

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The study was approved by the Ethical Committee of the CHA University Bundang CHA Hospital, Republic of Korea (application number: KNC12005). Human adult dermal fibroblasts (ScienCell Research Laboratories, Carlsbad, CA, USA) were cultured in DMEM (WelGENE, Daegu, Korea) supplemented with 10% fetal bovine serum (FBS), 2 mM L-glutamine (Invitrogen) and 1x penicillin/streptomycin (P/S) (all from Invitrogen, Carlsbad, CA, USA).
Human iPS cells were cultured on vitronectin XF (Primorigen Biosciences, Madison, USA) coated culture dishes using our recently established xeno-free/feeder-free hPSC culture medium with minor modifications [17 (link)]. Briefly, the medium consisted of DMEM/F12, 15% KnockOut SR XenoFree CTS, 1x nonessential amino acids (NEAA), 1x GlutaMAX, 0.1 mM β-mercaptoethanol, 1x P/S (all from Invitrogen), 10 ng/mL basic fibroblast growth factor (bFGF) (CHA Biotech Co., Daejeon, Korea), 10 nM trichostatin A (TSA) (Sigma-Aldrich, St. Louis, MO, USA), 5 uM Gö6983 (Tocris, Ellisville, MO, USA), and 1 mM dorsomorphin dihydrochloride (Tocris).
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2

Pluripotency Validation of iPS Cells

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To test their pluripotency, the iPS cell colonies were mechanically detached and cultured in suspension in Petri dishes (SPL Lifesciences, Pocheon, Korea) in embryoid body (EB) medium (DMEM/F12, 10% KnockOut SR XenoFree CTS, 1x NEAA, 1x P/S, and 0.1 mM β-mercaptoethanol; all from Invitrogen). After 5–10 days of 3-dimensional culturing, the EBs were attached to Matrigel (BD Biosciences, Bedford, MA, USA) coated slides and further cultured for 15 days in differentiation medium (DMEM/F12 supplemented with 1% NEAA, 1x P/S, 0.1 mM β-mercaptoethanol, and 10% FBS for endoderm and mesoderm or DMEM/F12 supplemented with 1x NEAA, 1% P/S, 0.1 mM β-mercaptoethanol, 1x N2 supplement, and 10 ng of bFGF for ectoderm). Several representative markers specific for derivatives of these three germ layers were used for immunostaining after differentiation. The antibodies used in this study are listed in Supplementary Table  2.
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3

Xeno-free Differentiation of hESCs to RPE

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We cultured Q-CTS-hESC-2 cell line [10 (link), 31 (link)] using xeno-free Essential 8™ Medium (A1517001, Gibco) to induce differentiation into RPE cells as previously described [10 (link)]. Briefly, the differentiation from hESC to RPE cells employs procedures such as super-confluence, acquired pigment foci, and excision. The culture medium for the RPE cells that diffused from the excised pigment foci contained 78% KO-DMEM CTS (Invitrogen), 20% Knock Out SR xenofree CTS (Invitrogen), 1% CTS glutaMAX-1 supplement (Invitrogen), 1% MEM NEAA (Invitrogen), and 1% 2-Mercaptoethanol (Procell). hESC-derived RPE cells were cultured in cell culture dishes at 37 °C in an incubator with 5% CO2/95% air, and the medium replaced every 2 days. Proliferating cultures were passaged 1:4, after being digested with CTS™ TrypLE™ Select Enzym (Gibco).
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4

Generating induced corneal endothelial cells

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hESC-derived NCCs were dissociated into single cells with TrypLE™ Select CTS™ and seeded onto vitronectin-coated plates containing iCECs differentiation medium and 10 µM Y27632 at a density of 5 × 104 cells/cm2. Basal medium consisted of KNOCKOUT™ DMEM/F-12 CTS™, KNOCKOUT™ SR XenoFree CTS™, 1% GlutaMAX™ CTS™, 1% MEM Non-Essential Amino Acids (NEAA) and 1% Insulin-Transferrin-Selenium (ITS) (all from Gibco), as well as 0.1% ascorbic acid (AA) (Sigma‒Aldrich). iCECs differentiation medium included basal medium and 10 µM SB431542, 10 ng/mL DKK2 (R&D Systems) and 100 nM SU-5402 (Biovision). Cells were cultured in differentiation medium for 12 days. The medium was changed every day.
To induce normal iCECs to fibroblast morphology, we used basal medium supplemented with 10 ng/ml TGFβ1 (Peprotech) to culture normal iCECs for 5 days. Next, replacing TGFβ1 with SB431542 and cultured the iCECs for another 7 days, then evaluated the expression of cell markers.
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5

Differentiation of Human ESCs to PLZF+ SLCs

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All PSC culture and differentiation were performed as previously described (Zhao et al., 2018 (link)). Briefly, human embryonic stem cell line H1 (WiCell) was maintained in chemically defined Essential 8 medium (Stem Cell Technologies). Cells were passaged every 5–7 days and dissociated by 1 mg/ml Collagenase IV (Millipore). ESCs were induced when reaching 80–90% confluence in differentiation medium [α-MEM (Gibco) containing 2 mM l-glutamine (Gibco), 1× Insulin-Transferrin-Selenium-X (Gibco), 0.2% KnockOut SR XenoFree CTS (Gibco), 1 ng/ml human b-FGF, 20 ng/ml human GDNF (Sino Biological), 0.2% chemically defined lipid concentrate, and 200 μg/ml vitamin C (Sigma)] (Zhao et al., 2018 (link)). Medium was changed every day. No passage of cells was performed during differentiation. By day 12, most cells were PLZF+ SLCs. SLCs were collected for analyses or sorted for transplantation on day 12 of ESC differentiation.
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