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Pa g column

Manufactured by YMC
Sourced in Japan

The PA-G column is a laboratory equipment designed for chromatographic separation and purification. It is a gel filtration column used for the separation of molecules based on their size and molecular weight.

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5 protocols using pa g column

1

Glycosaminoglycan Oligosaccharide Analysis

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An aliquot (2 μg) of CS was digested with CSase ABC (10 mIU) at 37 °C for 2 h in 50 mM Tris-HCl, 50 mM NaAc, PH 8.0. The digest was labeled with 2-AB [32 (link)] glycosaminoglycan-derived oligosaccharides labeled with a fluorophore 2-aminobeand subjected to anion-exchange HPLC on a YMC-Pack PA-G column eluted with a linear gradient from 16 to 474 mM NaH2PO4 over a period of 60 min being monitored at Ex 330 nm and Em 420 nm using a fluorescence detector (Shimadzu Co., Ltd., Kyoto, Japan) [30 (link)].
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2

Quantitative Disaccharide Analysis of GAGs

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Disaccharide compositions of various GAGs were analyzed by high HPLC as described previously (21 (link)). Briefly, to determine the disaccharide composition of commercial Hep, HS, or Hep/HS in the GAGs extracted from various cells or organs the GAG preparations obtained above were individually digested with by Hepases (I, II, and III) followed by labeling with 2-aminobenzamide. The labeled samples were analyzed by anion exchange HPLC on a YMC-Pack Polyamine II column (YMC-Pack) eluted with a linear gradient from 16 mM to 550 mM NaH2PO4 over 60 min at a flow rate of 1.0 ml/min at room temperature using a fluorescence detector with excitation and emission wavelengths of 330 and 420 nm, respectively. In the case of CS/DS disaccharide assay, CS/DS sample was digested with chondroitinase ABC (CSase ABC) followed by 2-aminobenzamide labeling and analyzed by anion exchange HPLC on a YMC Pack PA-G column as described above. The percentage of each component was calculated based on its peak area.
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3

Quantifying Heparan Sulfate Disaccharides

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The levels of total disaccharides of HS in C4-2 cells were determined as described previously69 (link). In brief, cells were collected using a rubber scraper, sonicated using an Ultrasonic homogenizer (Taitec), and treated exhaustively with actinase E (Kaken Pharm). The remaining proteins and peptides were precipitated with trichloroacetic acid, and then extracted with ether to remove trichloroacetic acid. The resultant crude GAG-peptide fractions were desalted by an Amicon Ultra-4 (3 K, Millipore), and treated with heparinase-I, heparinase-III (IBEX Pharmaceuticals), and heparinase-II (R&D Systems) mixture to analyze the disaccharide composition of HS and heparinase-resistant oligosaccharides, which may contain 3-O-sulfated GlcN residues. The digested samples were labeled with a fluorophore 2-aminobenzamide (2AB), and the resulting 2AB-derivatives of di- and oligo-saccharides were analyzed by anion-exchange HPLC on a PA-G column (YMC Co.)69 (link),70 (link). Unsaturated disaccharides in the digests were identified by comparison with the elution positions of authentic 2AB-labeled disaccharide standards and newly prepared 3-O-sulfate-containing oligosaccharides.
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4

Chondroitin Sulfate Chain Analysis

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To compare the internal structures of CS chains from the cartilage of different parts of Chinese sturgeon, 10 μg of each purified CS sample was partially digested at 37 °C for 24 h with 7.5 U of hyaluronidase from sheep testes. The digests were labeled with 2-AB and fractionated on a SuperdexTM Peptide 10/300 GL column eluted with 0.2 M NH4HCO3 at a flow rate of 0.4 mL/min for 60 min with fluorescent detection. The 2-AB-labeled oligosaccharide fractions were collected, freeze-dried, and analyzed by anion-exchange HPLC on a YMC-Pack PA-G column eluted with a linear gradient of NaH2PO4 at a flow rate of 1 mL/min at room temperature.
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5

Extraction and Analysis of Splenic GAGs

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GAGs from splenic cell preparations were prepared as described previously23 (link) with slight modifications. Briefly, cells were homogenized in ice-cold acetone at least thrice and air-dried. The dried materials (acetone powders) were exhaustively digested with heat-activated actinase E [10% (w/w) of dried materials] in 0.1 M borate buffer, pH 8.0, containing 10 mM CaCl2, at 55 °C for 48 h. The digest was treated with 5% trichloroacetic acid, and the resultant acid-soluble fraction was adjusted to contain 80% ethanol. The resultant precipitate was dissolved in water and subjected to gel filtration on a PD-10 column (Cytiva, MA, USA) using water as an eluent. The flow-through fractions were collected, evaporated to dryness, and dissolved in water (crude GAG fractions).
An aliquot of the crude GAG sample was digested with a chondroitin sulfate-degrading enzyme, chondroitinase ABC (5 mIU, Seikagaku, Tokyo, Japan) in 50 mM Tris–HCl, and 60 mM sodium acetate, pH 8.0, at 37 °C for 2 h. The digests were derivatized with the fluorophore 2-aminobenzamide and were then analyzed by anion-exchange HPLC on a PA-G column (YMC, Kyoto, Japan) as described previously24 (link). Identification and quantification of the resulting disaccharides were achieved by comparison with authentic unsaturated CS disaccharides (Seikagaku).
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