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Bond 3

Manufactured by Roche

The Bond III is a fully automated analyzer designed for clinical chemistry and immunochemistry testing. It offers high throughput capabilities and is suitable for a wide range of in vitro diagnostic applications in clinical laboratories.

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3 protocols using bond 3

1

Optimizing PD-L1 IHC Assay Protocols

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PD-L1 IHC using the PD-L1 IHC 22C3 pharmDx kit on the Dako ASL48 platform was performed according to manufacturer recommendations [10 ]. The 22C3 antibody in this kit is provided already diluted at an unspecified ratio. For development of high-quality laboratory-developed tests (LDTs), several technical conditions were evaluated (eg, slide thickness 3 μm versus 4 μm, pre-treatment delays, primary antibody dilution, incubation time, amplification systems) using the 22C3 antibody concentrate on the Dako ASL48, VENTANA BenchMark ULTRA and Bond-III platforms (S1 Table). Details of the optimised protocols are described below.
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2

Comprehensive Immunohistochemical Profiling

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Standard basic workup included all diagnostic antibodies: CD20, CD3, CD45, Pax5, CD30, and CD15. In addition, OCT2, CD79a, PD1, and programmed death ligand-1 (PD-L1) (Abcam, rabbit monoclonal, clone 28–8) were performed in a subset of cases. All immunohistochemical work except for p-STAT6Y641 staining was performed in the Clinical Immunohistochemistry Lab of the Pathology Department of University of Chicago Medicine. Immunohistochemical staining for all standard antibodies was performed on 4 μm thick tissue sections using either on the Leica Bond III or Ventana XT instruments with appropriate positive and negative controls. Sections were baked for 3 h at 60 °C in a dehydration oven.
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3

Standardization of PD-L1 Immunostaining Assays

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For the standardization/training set, we used 5 PD-L1 antibodies and 3 automated immunostaining platforms (Leica Bond III, Ventana Benchmark Ultra, and Dako AS Link 48), thus producing 8 combinations of antibodies and platforms. Four standardized PD-L1 assays were performed: 22C3 (Agilent/Dako, PD-L1 pharmDx assay tested in 2 centers), 28-8 (Agilent/Dako, PD-L1 pharmDx assay tested in 2 centers), SP142 (Ventana, Tucson, AZ, USA), and SP263 (Ventana). Tests were performed in accordance with the manufacturer's protocols. LDTs with clone QR1 (Quartett, Berlin, Germany) were tested on the 3 automated immunostaining platforms; LDTs with clone 22C3 were performed on a Leica Bond platform. These LDTs were previously validated in non-small cell lung cancer (21) .
For the validation set of 40 cases, we selected one protocol on each platform based on the best reproducibility (QR1 Leica Bond, SP263 Ventana, and 28-8 Dako).
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