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2 protocols using myhc iib efluor 660

1

Immunofluorescent Analysis of Muscle Cells

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Cells were first washed with Phosphate Buffer Saline (Thermo Fisher) and fixed with 4% Paraformaldehyde (MS). Cells were stained with the following primary antibodies and concentrations, MYHC‐IIb eFluor 660 (50‐6503‐32; Thermo Fisher; 1:100), α‐actinin (sc‐7453; Santa Cruz; 1:500), and myogenin (sc‐576; Santa Cruz; 1:200). Anti‐PARP‐1 (Santa, SC‐8007), anti‐XRCC1 (Cell Signalling, 2735S), anti‐gamma H2AX (Abcam, 2893), anti‐53BP1 (Abcam, ab175933), and anti‐Osteocalcin (Santa, SC‐365797).The following secondary antibodies were also used together with non‐conjugated primary antibodies, Goat‐anti‐mouse Alexa Fluor 488 (A11001; Thermo Fisher; 1:500), Goat‐anti‐rabbit Alexa Fluor 594 (A11012; Thermo Fisher; 1:500), and Goat‐anti‐mouse Alexa Fluor 647 (A21235; Thermo Fisher; 1:500). 4'6‐Diamidino‐2‐Phenylindole (d9542; Sigma) was used as a nuclear counter stain according to manufacturer's recommendations. Stained cells were imaged with a Zeiss fluorescence microscope.
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2

Immunostaining of Myogenic Cells

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For immunostaining, cells grown on plates were fixed with 4% paraformaldehyde at room temperature for 15 min and subsequently permeabilized with 0.3% Triton X-100/ PBS. Cells were blocked in 10% goat serum diluted in 0.1% Triton X-100/ PBS at room temperature for 1 h. Primary antibodies were diluted in 1% goat serum/ 0.1% Triton X-100 and incubated at room temperature for 2 h. Cells were washed and secondary antibodies were diluted in 1% goat serum/0.1% Triton X-100 and incubated at room temperature for 1 h. Cells were stained with Hoechst dye (1:2,000 in PBS) at room temperature for 10 min. Primary antibodies include: Pax3 (DSHB, 1:20), Pax7, (DSHB, 1:20), MyoD (Santa Cruz Biotechnology, sc-377460, 1:100), MyoG (Santa Cruz Biotechnology, sc-12732, 1:100), MYH1 (clone MF20, DSHB, 5μg/ml). MYHC-IIb eFluor 660 (50-6503-32; Thermo Fisher; 1:100), α-actinin (sc-7453; Santa Cruz; 1:500), 8-oxo-guanine (ab206461; Abcam; 1:400). Fusion index was calculated as a ratio of the number of tdTO+ or MuSC nuclei within a multinucleated myotube to the total number of tdTO+ or MuSC nuclei. A minimum of 4 independent microscopic fields was used for each group over three independent differentiation experiments at 24 and 36 hours in DM.
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