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2 protocols using anti acetyl histone h4 lys8

1

ChIP-qPCR Analysis of NOX4 Promoter

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Cells were cultured on 150 mm and fixed with 1% formaldehyde (10 min, RT), followed by 200 mM Glycine for 10 min. The cells were washed twice with ice-cold 1 X PBS, and collected in lysis buffer (1 × PBS containing protease inhibitor cocktail (PIC) and 0.5 mM PMSF). Chromatin preparations were sheared using ChIP-IT Express Enzymatic Shearing Kit according to manufacturer's protocols (Active Motif, Carlsbad, CA, USA). Immunoprecipitations were performed using Magna ChIP A/G Kit according to manufacturer's protocol (Millipore). The following antibodies were used for immunoprecipitation: anti-SMAD3 (E.980.9) (Thermo Fisher); anti-acetyl histone H4 (Lys8) (Millipore); anti-p53 (DO-1); mouse IgG (Santa Cruz, Dallas, TX, USA). Quantitative PCR was used to quantify the immunoprecipitated DNA with the following NOX4 promoter-specific primers: (R1) forward: 5′- AAGGGCATAAGGACCTCTCC-3′, reverse: 5′- AGGGAAAAGTGGTCCAAAG-3′; (R2) forward: 5′- CTGAATCAGATGATGGTCTACACTTG-3′, reverse: 5′- GGTCCAAAGGCTTAACATTC-3′; (R3) forward: 5′- AAGGGCATAAGGACCTCTCC-3′, reverse: 5′- GACTCATTCTCATTTCTAC-3′. The data are represented as fold change over IgG control antibody (Ct IP/Ct IgG). The Ct values were normalized to the input (1%) of sheared chromatin DNA. The data are represented as fold change above background = 2^(−ΔΔCt).
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2

Protein Expression and Apoptosis Analysis

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Fmoc-amino acids and 2-chlorotrityl chloride resin were purchased from GL Biochem (Shanghai, China). β-Alanine, 4-chloro-7-nitro-1,2,3-benzoxadiazole (NBD-Cl), crystal violet, bovine serum albumin (BSA), DAPI, propidium iodide (PI), l-phenylalanine and other chemical reagents were bought from Solarbio Science & Technology Co., Ltd. (Beijing, China). Alkaline phosphatase (ALP) and Lyso-Tracker Red were obtained from Yeasen Biotechnology (Shanghai, China). Dulbecco's modified Eagle's medium (DMEM), RPMI Medium 1640 basic and fetal bovine serum (FBS) were obtained from Gibco (Suzhou, China). Anti-γH2AX (phosphor A139) antibody and goat anti-rabbit IgG H&L (Alexa Fluor® 488) antibody were obtained from Abcam (Shanghai, China). PARP rabbit mAb, cleaved PARP (Asp214) rabbit mAb and caspase 3 rabbit antibody were purchased from Cell Signaling Technology (Shanghai, China). Anti-acetyl histone H3 and anti-acetyl histone H4 (Lys 8) antibodies were provided by Millipore (Billerica, USA). β-Actin Mouse mAb and peroxidase-conjugated affinipure goat anti-mouse/rabbit IgG (H + L) were bought from Proteintech Group Inc. (Wuhan, China). FITC Annexin V apoptosis detection kit was purchased from BD Pharmingen (San Diego, CA, USA). Dynasore was purchased from TCI Development Co., Ltd. (Shanghai, China).
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