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60 protocols using cadaverine

1

Quantifying Biogenic Amines in Cheese

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To determine the capability to produce cadaverine and putrescine, we incubated the cheese strains in IDM broth under aerobic conditions (adapted from Bover-Cid and Holzapfel, 1999 (link); without the addition of bromocresol purple and agar) at 37°C for 20 h. The broth was supplemented with 10 g L–1 L-lysine and 10 g L–1 L-ornithine (Merck, Darmstadt, Germany). A non-inoculated medium was used as a negative control and standard solutions of cadaverine (Sigma-Aldrich, Dr. Grogg Chemie AG, Stettlen-Deisswil, Switzerland) and putrescine (Merck, Darmstadt, Germany) served as positive controls. The cell suspension was centrifuged at room temperature with 4,000 g for 5 min.
We determined the content of biogenic amines using high-pressure liquid chromatography (HPLC). Therefore, we mixed 500 μL of the culture supernatant with 100 μL of 20 mM 1,7-diaminoheptane which served as internal standard. Then, 5 mL of extraction solution (0.1 M perchloric acid in 50% acetonitrile) was added. The mixture was centrifuged (890 × g for 10 min at 10°C). A 200 μL volume of the supernatant was then treated with dansyl chloride and analyzed using HPLC as described in Ascone et al. (2017) (link).
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2

Analytical-Grade Chemical Reagent Protocol

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Chemicals of analytical-grade reagents were used throughout the research, devoid of further purification. Double-distilled water was used for the preparation of solutions. The glasswares used during the experimental work were sanitized in nitric acid (HNO3) (0.1 N) (E. Merck, Germany), and then rinsed with double-distilled water and desiccated in a preheated oven (110°C). Sodium-tetrahydridoborate and magnesium carbonate were purchased from Fluka Switzerland; silver nitrate, sodium acetate, and sodium chloride from Scharlu, Spain; hydrochloric acid, sodium dodecyl sulfate, sodium bicarbonate, potassium chloride, ammonium chloride, ammonium acetate, L-tyrosine, pyrollol, gallic acid, L-cystein, valine, lucine, arginine, glutamine, guanidine, cadaverine and guanidine were obtained from Merck, Darmstadt, Germany.
Besides, putrescine dihydrochloride was purchased from Aladdin China. To maintain sensor application under suitable pH values in the experimental work, buffers ranging from 1 -10 were prepared. 33
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3

Electrochemical Biosensor Fabrication

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Molybdenum chloride, ethanol, phosphate-buffered saline (PBS), ammonium hydroxide, aniline, carbon ink (E3449), and Ag/AgCl ink (E2414) were purchased from Thermo Fisher Scientific. Lactate, UA, glucose, CAF, putrescine, cadaverine, glucose oxidase, iron(III) p-toluene sulfonate hexahydrate, and graphite flakes were purchased from Sigma-Aldrich. ZnO nanowires (NWZO01A5) were purchased from ACS Material. PDMS (Sylgard 184) was purchased from Dow. PI (Kapton 100HN) was received from Dupont. SEBS (H1062) was received from Asahi Kasei. Nafion solutions and WSe2 were purchased from Alfa Aesar.
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4

Analytical Standards for Metabolite Quantification

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The following standards were acquired from Sigma-Aldrich (Steinheim, Germany): glucose, sucrose, fructose, inositol, spermidine, spermine, cadaverine, putrescine, 1,6-hexaendiamine gallic acid, 6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid (Trolox), 2,2-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) diammonium salt (ABTS•+), and benzoyl chloride. Sodium hydroxide was purchased from Fluka (Buchs, Switzerland), and LC-MS grade organic solvents (Methanol, acetonitrile), together with sodium carbonate, Folin-Ciocalteu reagent, and ethyl ether, were purchased from Panreac Química (Barcelona, Spain). SPE cartridges (C18 Sep-Pak cartridges) were obtained from Waters Associates (Milford, MA, USA), and, lastly, ultrapure water was produced by a Millipore water purification system.
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5

Volatile Compound Analysis Protocol

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Volatile fatty acids, indole, cadaverine, putrescine, formic acid, ammonium acetate, methanol, acetone, ethanol, and water were acquired from Sigma Aldrich Ltd (Gillingham, UK). Food samples were acquired from a local supermarket. Standards were used to tune the instrument, optimise the conditions for each experiment and confirm the identity of analytes.
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6

Antioxidant Capacity Quantification Protocol

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Sodium hydroxide was purchased from Fluka (Buchs, Switzerland) and 2,2-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS•+), 6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid (Trolox), gallic acid, L-arginine, spermidine, spermine, cadaverine, histamine, putrescine, 1,6-hexaendiamine, benzoylchloride, glucose, sucrose, fructose, and inositol were obtained from Sigma-Aldrich (Steinheim, Germany). The SPE cartridges (C18 Sep-Pak cartridges) were bought from Waters Associates (Milford, MA, USA) and sodium carbonate, Folin–Ciocalteu reagent, ethyl ether, and LC-MS-grade methanol and acetonitrile were acquired from Panreac Química (Barcelona, Spain). Ultrapure water was produced using a Millipore water purification system.
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7

Synthesis and Characterization of Porphyrin Dyes

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The two porphyrins, 5-(N-methyl 4-pyridyl)-10,15,20-triphenyl porphine chloride (MMPyP, Figure 1A) and meso-tetra (N-methyl 4-pyridyl) porphine tetrachloride (TMPyP, Figure 1B), were supplied by Frontier Scientific (Logan, UT, USA) and used without further purification. Absolute ethanol from Sigma Aldrich was used as solvent. Hydrochloric acid, ammonia, butylamine, ethylenediamine, cadaverine, putrescine, and histamine were also purchased from Sigma Aldrich.
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8

Bacterial Viability Assay with Supplements

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Bacteria were harvested in saline. Samples of the bacterial suspension were diluted to 1.0 OD600 using no less than nine volumes of GCL-LA, NEG-LA or NEG-LA containing arginine, glutamic acid, lysine, agmatine, cadaverine or putrescine (all purchased from Sigma) at indicated pH. The final volume for each treatment was 1 ml. After 40 min incubation in a 37°C incubator containing air supplemented with 5% CO2, bacteria were collected by centrifugation and resuspended in phosphate-buffered saline containing 0.1% gelatin and 10 ng/ml PI. The bacterial suspension was incubated at room temperature for 10 min. Bacteria were again centrifuged, and washed once with the buffer supplemented with only 0.1% gelatin. Smears were prepared and viewed with a 100 X oil-immersion objective under an Olympus IX51 fluorescence microscope. All fluorescence images were acquired with equal exposure time for the same experiment.
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9

Quantification of Mycotoxins and Biogenic Amines

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acetonitrile (AcN) (HPLC grade), perchloric and acetic acid as well as acetone were from Merck (Darmstadt, Germany). Potassium dyhydrogen phosphate, phosphoric acid, sodium hydrogen carbonate, sodium hydroxide, sodium chloride and polyethylene glycol 8000 were purchased from Sigma-Aldrich (St. Louis, MO, USA). Ammonia solution (25%) was from Kemika (Zagreb, Croatia).
Standards of malic acid, lactic acid, ochratoxin A (10 µg/mL in acetonitrile) as well as BA: Putrescine, cadaverine, histamine, tyramine, derivatizating agent dansyl chloride and internal standard 1.7-diaminoheptane were from Sigma-Aldrich (St. Louis, MO, USA).
OTA standard solutions for calibration purpose were prepared by dissolving aliquots of stock solution in the mobile phase. Stock standards of each BA and the internal standard (1000 mg/L) were prepared with deionised water (Siemens Water Technologies Corp, Warrendale, PA, USA).
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10

Lysine Metabolism Biochemical Assays

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l‐Lysine and 5‐aminopentanoate were purchased from Tokyo Chemical Industry Co., Ltd. (https://www.tcichemicals.com); cadaverine, δ‐valerolactam, 1‐formylpyrrolidine, 1,9‐diaminononane and β‐nicotinamide adenine dinucleotide (NAD+) were obtained from Sigma‐Aldrich (http://www.sigmaaldrich.com); 5‐aminopentanal was acquired from Activate Scientific (https://shop.activate-scientific.com); [α‐15N]‐l‐Lysine and [ε‐15N]‐l‐lysine were purchased from Cambridge Isotope Laboratories Inc. (http://www.isotope.com); l‐ornithine, putrescine and all LC‐MS‐grade buffers used for LC‐MS were purchased from FUJIFILM Wako Pure Chemical Co. (http://www.wako-chem.co.jp).
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