The largest database of trusted experimental protocols

209 protocols using coomassie brilliant blue g 250

1

SDS-PAGE Protein Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
For SDS-PAGE analysis, precast 4–20% Bis-Tris gradient gels (Genscript, Picastaway, USA) in a Tris-MOPS running buffer was used. The molecular weight marker was Pierce™ Unstained MW marker (Thermo Scientific). Maximum volume of 20 µL was loaded in the wells on the SDS-PAGE gel. Solubilized extracts were mixed 14:5:1 with a 4xSDS sample buffer (50 mM Tris (VWR, Leuven, Belgium) pH 6.8, 2% SDS, 10% glycerol (VWR), 0.02% bromophenol blue (Sigma-Aldrich), 12.4 mM ethylenediaminetetraAcetic acid (EDTA, Carl Roth, Karlsruhe, Germany)) and 1 M dithiothreitol (DTT, Thermo Scientific), corresponding to a final DTT concentration of 50 mM. The samples incubated at 95 °C for 5 min to denature proteins. Running time for the gel was 45 min at 140 V. To visualize proteins, the gel was stained with Coomassie Brilliant Blue G250 (29 mM Coomassie Brilliant Blue G-250 (Sigma-Aldrich), 45% Ethanol (VWR), 10% Acetic acid (Fisher Scientific, Loughborough, UK)). Destaining of the gel was performed overnight with destain solution (8% Ethanol, 5% Acetic acid). Imaging of the gel was done using a ChemDoc MP Imaging System (Bio-Rad, Hercules, USA).
+ Open protocol
+ Expand
2

Gelatin Zymography of MMP2 Secretion

Check if the same lab product or an alternative is used in the 5 most similar protocols
To assess whether MMP2 was secreted from HGFs as an active enzyme or as a proenzyme, gelatin zymography was conducted. Cell culture supernatatants were collected, and the total protein concentration was enhanced by filtering samples using Vivaspin 4 concentrators with a pore size of 10,000 MWCO (Sartorius Stedim Biotech, Gloucestershire, UK). Total protein was measured by BCA assay (Life Technologies, Darmstadt, Germany). Sodium dodecyl sulfate gels containing 20 mg/ml gelatin (Merck Millipore, Darmstadt, Germany) were prepared, and polyacrylamide gel electrophoresis was performed under non-reducing conditions, adding 20 μg/ml of sample into each well. Subsequently, gels were stained with 0.05% Coomassie Brilliant Blue G250 (Merck Millipore, Darmstadt, Germany) for 2h and destained in deionized water containing 8% acetic acid and 4% methanol for 2h. Destained bands were recorded using a Gel Doc XR+ system (Bio Rad, Hercules, CA, USA).
+ Open protocol
+ Expand
3

Comprehensive Cell Culture Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dulbecco’s Modified Eagle’s Medium (DMEM, with high or low glucose), fetal bovine serum (FBS), L-glutamine, penicillin and streptomycin, 1-(4,5-dimethylthiazol-2-yl)-3,5-diphenyl formazan (MTT), 2,2-diphenyl-1-picrylhydrazyl (DPPH), 3-(2-pyridyl)-5,6-diphenyl-1,2,4-triazine-p,p′-disulfonic acid hydrate (Ferrozine®), Folin-Ciocalteau reagent, gallic acid, ascorbic acid, Oil red O solution, Coomassie Brilliant Blue G-250, gelatin, and all chemicals and solvents were purchased from Merck KGaA (Darmstadt, DA, Germany). Electrophoresis reagents were purchased from Bio-Rad Laboratories (Hercules, CA, USA). Primary antibodies were supplied by Cell Signaling Technology (Beverly, MA, USA), Molecular ProbesTM (Invitrogen, Carlsbad, CA, USA), and Santa Cruz (Heidelberg, Germany) (Table 3). HRP-linked anti-mouse IgG and anti-rabbit IgG secondary antibodies were obtained from Molecular ProbesTM (Invitrogen, Carlsbad, CA, USA). Disposable plastic was provided by Sarstedt (Milan, Italy).
+ Open protocol
+ Expand
4

Analysis of Graham flour properties

Check if the same lab product or an alternative is used in the 5 most similar protocols
Graham flour was kindly donated by the bakery Hlebček d.o.o. (Pragersko, Slovenia). Analyses were conducted using carbon dioxide (99.5% purity) produced by Messer, Ruše. Ethanol, phosphoric acid, and Coomassie-Brilliant Blue G250 were supplied from Merck (Darmstadt, Germany), while bovine serum albumin (BSA), sodium acetate, potassium phosphate, l-3,4-dihydroxyphenylalanine, l-ascorbic acid, and ethylenediaminetetraacetic acid were supplied from Sigma (Steinheim, Germany). All other chemicals used in the laboratory were of analytical grade.
+ Open protocol
+ Expand
5

Serum Albumin Characterization Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human serum albumin (HSA) (Sigma, A9511), sodium dodecyl sulphate (Merck, Germany), tetramethylethylenediamide (Applichem, A1148), ammonium persulphate (Merck, Germany), acrylamid for electrophoresis (Merck, Germany), N-N′-methylene diacrylamide (Merck, Germany), sodium carbonate (Merck, Millipore), formaldehyde 37% (Merck, Germany), tris-base, methanol (Merck, Germany), ethanol (Merck, Germany), glycerol (Merck, Germany), acetic acid (Glacial, Merck), 2,4-Dinitrophenylhydrazine (DAEJUNG, South Korea), trichloroacetic acid (TCA) (Merck, Germany), guanidine-Hcl (DAEJUNG, South Korea), ethyl acetate for analysis (Merck, Germany), bromophenol blue (Merck, Germany), sodium thiosulfate pentahydrate (Merck, Germany), hydrogen peroxide 30% (Merck, Millipore), ferrous sulphate (SIGMA, F7002), DTNB(5,5-dithiobis(2-nitrobenzoic acid) 99% (SIGMA), Hcl 37% (Merck, Germany), 1,4-Dithiothreitol (Scharlau Chimie S.A, European Union), Coomassie Brilliant Blue G250 for electrophoresis (Merck, Germany).
+ Open protocol
+ Expand
6

Chitosan-Based Nanoparticles for Protein Delivery

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chitosan low-viscous from shrimp shell was purchased from Sigma - Aldrich (chemie GmbH, CH-9471 Buchs). Sodium tripolyphosphate anhydrous (MW=367.86 g.moL-1(Na5P3O10) was purchased from Scharlau chemie S.A. As a model protein for determination of loading efficiency and controlled release, Bovine Serum Albumin (BSA)
(Albumin fraction V) was purchased from Merck. Tween 80 as an emulsifier agent was purchased from Merck-Schuchardt. Coomassie Brilliant Blue G 250 for preparation of Bradford reagent was purchased
from Merck. Purified ε-toxin was prepared from Razi Vaccine and Serum Research Institute, Mashhad, Iran. 2,2-azino-bis (3-ethylbenzothiazoline – 6 – sulfonic acid) - Liquid substrate system (ABTS)
was purchased from sigma.
+ Open protocol
+ Expand
7

Hyaluronate-based Biomaterial Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sodium hyaluronate (HA, 1.0–1.8 MDa) was obtained from Lifecore Biomedical (Chaska, MN, USA). BSS was obtained from Sigma Aldrich (Gillingham, Dorset, UK). SO (S500 and S1000) was purchased from VWR International Ltd (Lutterworth, Leicestershire, UK). Coomassie® Brilliant Blue G250 (Merck, Darmstadt, Germany) was used for visualization.
+ Open protocol
+ Expand
8

Bacteriocin Identification by SDS-PAGE

Check if the same lab product or an alternative is used in the 5 most similar protocols
The presence of putative bacteriocin was checked by running the CFS and the precipitated sample in SDS-PAGE [24 (link)]. Here, Tris-glycine sodium dodecyl sulfate–polyacrylamide gel electrophoresis was used, employing a vertical slab gel apparatus (MiniPROTEAN Tetra Cell, BioRad, Hercules, CA, USA) with 4% stacking gel and 12% separating gel. SDS-PAGE was run at 100 V for 1.5 h along with the Spectra™ Multicolor Broad Range Protein Ladder (10 to 260 kDa, Thermo Fisher Scientific). Upon completion, the gel was stained with Coomassie brilliant blue G-250 (Merck, Darmstadt, Germany) and destained using a methanol and acetic acid solution with a 3:1 ratio. The proteins observed below ~10 kDa of the ladder were putatively identified as bacteriocin.
+ Open protocol
+ Expand
9

Purification and Detection of Recombinant VP2 Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Sf9 cells were infected with virus rAc-tVP2 or rAcBac at an MOI of 5.0 and cultured at 27 °C for 96 h. The cells were collected via centrifugation, resuspended in PBS (pH 7.4), and lysed by ultrasonic crushing. The cell debris and supernatant were separated via centrifugation at 4 °C with 12,000 rpm for 30 min, and the total protein was boiled for 10 min in sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) sample loading buffer (Beyotime, Shanghai, China) and subjected to SDS-PAGE. Samples on 10% SDS-polyacrylamide gels were stained with Coomassie Brilliant Blue G-250 or transferred onto nitrocellulose membranes (Merck Millipore, Burlington, MA, USA) using a Mini PROTEAN ® Tetra Cell (Bio-Rad, Hercules, CA, USA). Mouse antiserum against the Flag tag (diluted 1:2000 in PBST, BOSTER, Wuhan, China) was used as the primary antibody and horseradish peroxidase-labeled goat anti-mouse IgG (diluted 1:2000 in PBST, BOSTER, Wuhan, China) as the secondary antibody for western blot analysis. Antibody binding was detected using the enhanced chemiluminescence system (Merck, Darmstadt, Germany).
+ Open protocol
+ Expand
10

Calcium-Poloxamer-Xanthan Gel Formulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Calcitermin (Cal) was purchased from KareBay Biochem (Monmouth Junction, NJ, USA) with a certified purity of 98%. The copolymer poly(ethylene glycol)-block-poly(propylene glycol)-block-poly(ethylene glycol) poloxamer 407 (p-407) (PEO98-POP67-PEO98), xanthan gum from Xanthomonas campestris (x-gum) composed of a β-(1→4)-D-glucopyranose glucan backbone with side chains of (1→3)-α-D-mannopyranose-(2→1)-β-D-glucuronic acid-(4→1)-β-D-mannopyranose on alternating residues, average molecular weight of about 2000 kDa, and Coomassie brilliant blue G 250 were purchased from Merck (Milan, Italy). Nylon membranes (2.5 cm diameter, pore size 0.2 μm) and nylon syringe filters (0.22 μm pores) were purchased from Merck (Milan, Italy). Solvents were of HPLC grade, and all other chemicals were of analytical grade.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!