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Hif 1α

Manufactured by Affinity Biosciences
Sourced in United States, China

HIF-1α is a protein that plays a central role in the cellular response to hypoxia, or low oxygen conditions. It is a transcription factor that regulates the expression of genes involved in processes such as angiogenesis, erythropoiesis, and glycolysis. HIF-1α is a key component of the hypoxia-inducible factor (HIF) complex, which acts as a master regulator of the cellular response to low oxygen levels.

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13 protocols using hif 1α

1

Immunohistochemical Analysis of Tissue Samples

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After the embedded tissue was cut into 4 μm sections and deparaffinized, the sections were treated with 3% H2O2 for 10 min to block endogenous peroxidase activity. After antigen retrieval in a microwave oven, the sections were incubated with normal goat serum at 37 °C for 10 min. Afterwards, the sections were incubated with the following primary antibodies: SMA (Affinity, Changzhou, China), HIF-1α (Affinity, Changzhou, China), E-cadherin (Affinity, Changzhou, China) and Vimentin (Affinity, Changzhou, China). After 2 h, the sections were washed and incubated with a secondary antibody (Zhongshan Biotechnology Co., Ltd., Beijing, China) at 37 °C for 30 min. After staining with 3,3′-diaminobenzidine, the tissues sections were incubated with hematoxylin staining solution for 20 s, washed with tap water for 5 min, and observed for staining intensity under a microscope. Each experiment was performed in triplicate.
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2

Western Blot Analysis of Protein Expression

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The cells and tissue specimens were lysed with radioimmunoprecipitation assay buffer (Beyotime Institute of Biotechnology, Shanghai, China) containing phenylmethanesulfonyl fluoride (Beyotime) and a protease inhibitor (CoWin Biosciences). The protein concentration was determined using a bicinchoninic acid protein assay kit (Beijing Solarbio Science and Technology Co., Ltd. Beijing, China). Each sample with equal amounts of protein were separated using 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis. After running 1–2 h under 120V, the protein was transferred onto a polyvinylidene difluoride membrane. Next, the membranes were blocked with 5% not-fat milk for 1 h at room temperature and incubated with primary antibodies c-Myc, HIF-1α, CXCR4, SDF-1, vimentin, E-cadherin, and β-actin overnight at 4°C (Affinity Biosciences). Subsequently, the membranes were washed 3 times with tris-buffered saline and Tween-20 and incubated with a horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse secondary antibody (Cell Signaling Technology, Beverly, MA, USA). Finally, the membranes were treated with a chemiluminescence reagent and exposed to X-ray. The band intensities were quantified using image J software (National Institutes of Health, Bethesda, MD, USA). Relative protein expression was quantified using control protein β-actin.
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3

Immunohistochemical Analysis of Estrogen Receptors and HIF-1α

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Immunohistochemistry staining was performed on paraffin sections using rabbit monoclonal antibodies against ERα (1:50 dilution, Affinity, USA), ERβ (1:50 dilution, Affinity, USA), GPER (1:50 dilution, Abcam, USA), and HIF-1α (1:150 dilution, Affinity, USA). Sections were deparaffinized and rehydrated in graded ethanol, and antigen retrieval was performed in citrate (pH 6.0) for 3 min at full pressure using a pressure cooker. Sections were then treated with 3% hydrogen peroxide for 5 min to inhibit endogenous peroxidase activity. After blocking in solution (0.01 mol/L Tris, 0.3% Triton X-100, and 10% normal goat serum) for 30 min, sections were incubated with primary antibodies at 4°C overnight. After washing with PBS, sections were incubated with peroxidase-labelled anti-rabbit IgG for 30 min. Finally, all slides were incubated with DAB-Substrate (Beyotime, China) and counterstained in hematoxylin before they were dehydrated and mounted.
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4

Western Blot Analysis of Nucleus Pulposus Cells

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The cells of the nucleus pulposus in every group were rinsed twice using PBS, then treated with 1% phenylmethanesulfonyl fluoride (PMSF) in RIPA lysis buffer (R0010, Solarbio) for a duration of 10 minutes. After that, they were subjected to centrifugation at 15,000×g for 10 minutes at a temperature of 4°C. The BCA protein assay kit (P0010, Beyotime) was used to measure protein concentrations. After that, the proteins were separated using 12.5% SDS-PAGE and then transferred to PVDF membranes (TM-PVDF-R-45, LABSELECT). Following a 90-minute incubation at room temperature with Western Blocking Solution (P0023B, Beyotime), the membranes were then subjected to overnight incubation at 4 °C with the primary antibodies HIF-1α (BF0593, Affinity, USA), CITED2 (DF2455, Affinity, USA), HIF-2α (DF2928, Affinity, USA), VEGFA (AF5131, Affinity, USA), and GAPDH (AF7021, Affinity, USA). Next, the membranes were exposed to secondary antibodies (LF102, EpiZyme, MA) for a duration of 1 hour at ambient temperature. Proteins of interest were identified following the established procedure. Blots were visualized using BeyoECL Plus (P0018FM, Beyotime, China). The quantification of the density of each band was performed using Image J version 1.8.0.
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5

Osteogenic and Angiogenic Biomaterial Synthesis

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Polyvinyl alcohol, (NH4)2HPO4 (99%), Ca(NO3)2•4H2O (99%), Li3PO4 (99%), CoCl2 (99%), NH3•H2O (25–28%), and Tris–HCl were purchased from Sinopharm Chemical Reagent Co., Ltd. Simulated body fluid (SBF) was purchased from Leagene (China). Minimum Eagle's medium (MEM), Dulbecco’s modified Eagle’s medium/Ham’s F-12 (DMEM/F-12), and fetal bovine serum (FBS) were purchased from HyClone (USA). Endothelial cell medium was obtained from ScienCell (USA). The NBT/BCIP staining kit and detection kit for ALP activity and calcium content were purchased from Beyotime Company (China). The CCK-8 assay was obtained from Dojindo (Japan). MTT, phalloidin, and 4',6-diamidino-2-phenylindole (DAPI) were purchased from AAT Bioquest (USA). Primary antibodies against ALP, BMP-2, RUNX2, OCN, HIF-1α, VEGF, GAPDH, and HRP-conjugated secondary antibodies were obtained from Affinity (China).
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6

Protein Expression Analysis in SKOV3 Cells

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The proteins were obtained from different treatments of SKOV3 cells using RIPA reagent (Beyotime, Beijing, China) and phenylmethanesulfonyl fluoride (Beyotime, Beijing, China), and the protein concentrations were measured using a BCA protein assay kit (Thermo Fisher Scientific). The protein was separated by 10% SDS–PAGE and transferred onto a polyvinylidene fluoride (PVDF) membrane (EMD Millipore, Billerica, MA, USA). The membranes were blocked with 5% nonfat milk for 1 hour and incubated with specific primary antibodies at 4°C overnight. The primary antibodies were HIF-1α (dilution 1:1,000; Affinity Biosciences) and IL-6 (dilution 1:1,000; Affinity Biosciences). The membranes were incubated with secondary antibody glyceraldehyde phosphate dehydrogenase (GAPDH) (dilution 1:500; Affinity Biosciences) for 2 hours at room temperature. The target proteins were visualized using enhanced chemiluminescence solution (Thermo Fisher Scientific).
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7

Nuclear and Cytoplasmic Protein Extraction

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The Nuclear and Cytoplasmic Protein Extraction Kit (Beyotime Biotechnology Co., Ltd. P0027) was used to extract nuclear and plasma proteins from the tissues and cells. All lysates contained protease inhibitors. The quantified proteins were separated by 10% SDS-PAGE. After transferring the protein to the PVDF membrane and blocking with 5% BSA, the PVDF membrane was blocked at room temperature with the following primary antibodies: HIF-1α (Affinity, Changzhou, China), TGFΒ1 (Affinity, Changzhou, China), SAMD3 (Affinity, Changzhou, China), p-SMAD3 (Affinity, Changzhou, China) E-cadherin (Affinity, Changzhou, China), Vimentin (Affinity, Changzhou, China), Lamin B (Affinity, Changzhou, China) and GAPDH (Affinity, Changzhou, China). GAPDH and Lamin B were used as loading controls. After 4 h, the excess primary antibody was removed, and the PVDF membrane was incubated with HRP-labelled secondary antibody at room temperature for 2 h. Protein intensity was detected with an Image Lab instrument (Bio-Rad, USA). Each experiment was performed in triplicate.
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8

Western Blot Analysis of Membrane Proteins

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Whole-cell lysates were prepared using RIPA containing protease and phosphatase inhibitors (Beyotime, Shanghai, China). The protein was quantified with BCA kit (Solarbio, Beijing, China), separated on a 10% SDS-polyacrylamide gel electrophoresis and transferred onto 0.45 μm PVDF membranes (Invitrogen, Carlsbad, USA). Membranes were blocked using 5% bovine serum albumin for 1 h at room temperature and incubated with primary antibodies at 4 °C overnight After washed three times by TBST for 10 min intervals, membranes were incubated with diluted secondary antibodies for 1 h at room temperature. The expression of proteins was assessed using an ECL kit (Tanon, Shanghai, China), and quantified by the image J software. The expression of β-actin did not change significantly either under hypoxia or after drug treatments, which was used as an internal parameter in our experiment accordingly.
The primary antibodies used were antibodies against α-ENaC (1:2000, Invitrogen, Carlsbad, USA), γ-ENaC (1:2000, Abcam, Cambridge, USA), β-actin (1:2000, Proteintech, Chicago, USA), HIF-1α (1:1000, Affinity Biosciences, Cincinnati, USA), ERK1/2, p-ERK1/2 (1:1000, Cell Signaling, Mass, USA), inhibitor κBα (IκBα), p-IκBα, p65, and p-p65 (1:1000, Abmart, Shanghai, China). The secondary antibodies used were goat anti-rabbit or goat anti-mouse antibodies (1:5000, ZSGB-bio, Beijing, China), respectively.
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9

Immunohistochemical Analysis of Intestinal Markers

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Before immunostaining, tissue sections were deparaffinized and rehydrated, and antigen retrieval was performed in citrate buffer (pH 6). The sections were then treated with 0.3% hydrogen peroxide to block endogenous peroxidase activity. After being washed in PBS, tissues were blocked with 5% normal goat serum for 1 h and stained with the following primary antibody overnight: Muc2 (1:1,000, Proteintech), Ki67 (1:50, Abcam, Cambridge, MA, USA), Lgr5 (1:400, Affinity Biosciences, Cincinnati, OH, USA), Caspase3 (1:2,000, Cell Signaling Technology, Danvers, MA, USA), Occluding (1:200, Abcam), CCL7 (1:200, Bioss), p-IκBα (1:200, Affinity Biosciences), HIF1α (1:100, Affinity Biosciences), or CYP1A1 (1:200, Proteintech). The sections were repeatedly washed with PBS and stained with horseradish peroxidase (HRP)-labeled secondary antibody (Zsbio, Beijing, China) for 30 min at room temperature. Bound antibodies were measured with diaminobenzidine chromogenic substrate (Zsbio). The sections were finally counterstained with hematoxylin, dehydrated, and mounted. Tissues were examined and imaged using an Olympus BX46 microscope. The intensity of the staining was analyzed by the software Image Pro Plus.
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10

Evaluating Antioxidant and Angiogenic Factors

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Healthy adult male Sprague–Dawley rats, aged 6–9 weeks and weighing 200–250 g, were purchased from the Experimental Animal Center of Wenzhou Medical University (WMU) and kept in separate cages under controlled temperature (24°C ± 0.5°C) and humidity (45–50%) conditions, with good ventilation and ad libitum access to water and standard rodent chow. Animal experiments were performed in accordance with the Guidelines for Ethical Review of Laboratory Animals and 3R principles, and were approved by the Ethics Committee for Experimental Animals of Wenzhou Medical University (ID number: WYDW 2017-0509). All experimental procedures were performed using standard methods. Superoxide dismutase (SOD) and malondialdehyde (MDA) detection kits were obtained from Jiangsu Jiancheng Technology Co., Ltd. (Nanjing, Jiangsu, China). Antibodies to IL-1β, IL-18, CD34, VEGF, and HIF-1α were purchased from Affinity Biosciences (Cincinnati, OH, United States). Rivastigmine (≥98% purity) was purchased from Novartis (Basel, Switzerland).
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